Gene Information

Name : nrdE (Dda3937_03977)
Accession : YP_003884193.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : ribonucleoside-diphosphate reductase 2 subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 3662932 - 3665079 bp
Length : 2148 bp
Strand : +
Note : -

DNA sequence :
TTGGCTACAGCAGAATTCCTGACCGACGCGCCTTCCAGCCAGCTGGATTACCATGCGCTCAACGCCATGCTGAACATCTA
CGACGCCGACGGCCGTATTCAGTTTGAGCAGGATCGGCAGGCCATTCAGGTCTATTTCCGCGATCATGTGCTGCCGCGCA
CCCGTCATTTCCCGTCTCTGGAAGAGAAATTACGCTGGCTGCAACAGGAAGGGTATTACGAGCCCCAGGTACTGGCACGC
TACCAGCTGGACTTCATCGTCGAACTGTTCCAGCGCGCGGCCGAACATCGCTACCAGTTCCAAAGCTTTCTGGGTGCCTT
CAAGTTTTACACCAGCTATGCGCTGAAAACCTTCGACGGCAGCCAGTATCTGGAAAGCTATGACGACCGGGCCTGCATGG
TGGCGCTGACGCTGGCGCAAGGCGACACGCAACTGGCCCGTCAACTGGTGGATGAAATGATGAGCGGCCGCTTCCAGCCT
GCCACGCCGACTTTCCTCAATTGCGGCAAACAGCAGCGCGGCGAGCTGGTGTCCTGCTTTCTGCTACGTATCGAGGACAA
CATGGAGTCCATCGGCCGGGCGGTCAATTCGGCGCTGCAACTCTCCAAACGCGGCGGCGGCGTAGCCTTTATGCTGACCA
ATATCCGCGAAACCGGCGCGCCGATAAAACGCATCGAAAACCAGTCATCCGGCGTCATTCCGATTATGAAAATGCTGGAA
GACGCGTTTTCCTACGCCAATCAGCTCGGTGCCCGCCAGGGAGCCGGAGCGGTTTACCTGCACGCCCATCACCCAGATAT
CCTGCGTTTTCTTGATACCCGCAGGGAAAACGCCGACGAGAAAATCCGCATCAAAACCCTGTCGTTGGGGGTGGTCATTC
CGGACATTACGCTGCGGCTGGCCCGCGCCAATCAGGATATGCACCTGTTTTCACCCTATGACGTTGAGCGGGTGTATGGC
ATGCCGCTGTCGGAAATCAGCGTCAGCGAAAAATACGATGAACTGGTCAGCCATCCCGGTATTCGCAAATGGACCCTCAA
CGCCCGCCAGTTTTTCCAGACGCTGGCCGAGATCCAGTTTGAATCCGGTTACCCCTACCTGATGTTCGAAGATACCGTGA
ACCGCCACAACCCGGTGGCCGGCCGCATCACCATGAGCAACCTGTGCTCGGAAATTTTGCAGGTCAGCCGCGCCAGCGAG
TATCAGGAGGATTTGAATTATCGTCAGGTCGGGAAGGACATTTCCTGTAACCTCGGGTCGCTCAATATCGCCCGTGTGAT
GGATGGCGGCAACCTGGCCCGAACAGTGGAAATCGCCGTGCGGGCGCTGACAGCGGTGTCCGACATGAGCCATATCGGCG
CGGTGCCGTCTATCGCCAACGGCAATACTGAATCTCACGCTATCGGGCTGGGGCAGATGAACCTGCACGGCTATCTGGCG
CGCGAAGGGTTGTTTTACGGTTCAGAAGAAGCGCTGGATTTTACCAACCTTTATTTTTACGCCGTGACGTATCACGCCTT
GCGCACCTCCAGCCGGCTGGCACAAGAGCGTAACCAAACCTTCGCCGGTTTCGCCGATTCGCAGTACGCTAGCGGCGCGT
TTTTTGATCGTTATCTGTCGCAAGAGTGGCAGCCGGTCACGGAGCGTGTGCGCGAACTATTCGCTTGCGCCGGCATTGCG
CTGCCTTTACCGGAAGACTGGCTAGCGCTAAAAGCGCAGGTGATGCGCCACGGACTCTACAATCAGAACCTACAGGCGGT
GCCGCCCACCGGTTCGATTTCCTATATCAATCATGCCACGGCGAGCATCCACCCGATTGTTTCGCGCATCGAGATCCGCA
AGGAAGGCAAGCTGGGACGGGTTTACTACCCTGCCCCGTACATGACTAACGACAACCAACGCTTTTATCAGGACGCCTAT
GAGATCGGTCCGGAGAAAATCATCGACACCTATGCCGTGGCGACCCGCCATGTCGATCAAGGGCTGTCGCTGACGTTATT
TTTCCCCGATACCGCCACCACCCGCGATATCAACAAAGCGCAGATCTACGCCTGGAAAAAAGGCATCAAGACCCTGTACT
ACATTCGCGTACGCCAAAAAGCGCTGGAAGGCACCGAGATCCAGGGCTGTGTGTCCTGCTCGCTGTAA

Protein sequence :
MATAEFLTDAPSSQLDYHALNAMLNIYDADGRIQFEQDRQAIQVYFRDHVLPRTRHFPSLEEKLRWLQQEGYYEPQVLAR
YQLDFIVELFQRAAEHRYQFQSFLGAFKFYTSYALKTFDGSQYLESYDDRACMVALTLAQGDTQLARQLVDEMMSGRFQP
ATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFMLTNIRETGAPIKRIENQSSGVIPIMKMLE
DAFSYANQLGARQGAGAVYLHAHHPDILRFLDTRRENADEKIRIKTLSLGVVIPDITLRLARANQDMHLFSPYDVERVYG
MPLSEISVSEKYDELVSHPGIRKWTLNARQFFQTLAEIQFESGYPYLMFEDTVNRHNPVAGRITMSNLCSEILQVSRASE
YQEDLNYRQVGKDISCNLGSLNIARVMDGGNLARTVEIAVRALTAVSDMSHIGAVPSIANGNTESHAIGLGQMNLHGYLA
REGLFYGSEEALDFTNLYFYAVTYHALRTSSRLAQERNQTFAGFADSQYASGAFFDRYLSQEWQPVTERVRELFACAGIA
LPLPEDWLALKAQVMRHGLYNQNLQAVPPTGSISYINHATASIHPIVSRIEIRKEGKLGRVYYPAPYMTNDNQRFYQDAY
EIGPEKIIDTYAVATRHVDQGLSLTLFFPDTATTRDINKAQIYAWKKGIKTLYYIRVRQKALEGTEIQGCVSCSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 70