|
Name : outF (Dda3937_02417) Accession : YP_003883931.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 3393439 - 3394665 bp Length : 1227 bp Strand : - Note : - DNA sequence : ATGGCGCTGTTCCAGTATCAGGCATTGAACGCCCAGGGAAAGAAAAGCCAGGGCATGCAGGAAGCGGATTCTGCCCGTCA TGCGCGTCAGTTGCTGCGTGAAAAGGGACTGGTGCCGGTCAAAATTGAGGAACAGCGCGGCGAGGTGACGACCCGTAGCG GCTTCTCCCTGTCGTTGCGCCGTTCGCATCGCATTAGCGCCAGCGATCTGGCCTTGCTGACTCGCCAACTGGCGACGCTG GTGGCGGCGGCATTGCCGCTGGAAGAAGCGCTGGACGCCGTGGCGAAACAGAGCGAAAAGCCGAAGCTGAGCGCGCTGAT GGCGGCGGTGCGCGCCAAGGTGGTGGAAGGGCATTCGCTGGCCGAGGCGATGGGCAATTTCCCCGGTAGTTTCGAACGTC TGTATTGCGCCATGGTGGCGGCGGGCGAAGCATCCGGCCATCTGGATGCGGTGCTGAACCGGCTGGCGGATTACACCGAA CAGCGTCAGCAGATGCGCAGCCGTATCCAACAGGCGATGATTTATCCTTGCGTGTTGACGCTGGTGGCGATTTCGGTGGT GTCTATCCTGCTGTCCGCCGTTGTGCCCAAGGTGGTCGAACAGTTTATTCATATGAAGCAGGCGTTGCCGCTGTCCACCC GACTGCTGATGGGCGTCAGTGATGCGGTGAGAGCCTACGGGCCGTGGGTGGTGTTATTGCTGGTGCTGGCGGTGATGGGG TTTCGCGTGTTGCTGCGCCAGGAAAAACACCGCCTCGTCTTCCATCGGCGTTTGCTGTTCCTTCCCTTGATCGGGCGTAT TGCGCGGGGGCTTAACACCGCCCGCTACGCTCGGACCCTGAGCATTCTTAATTCCAGCGCCGTGCCGCTGTTGCAGGCGA TGCGTATCAGCGGCGATGTGTTGACCAACGATTATGCCCGCTTCCGGCTGGGGCAGGCGACTGATGCGGTACGTGAGGGC GTGAGCCTGCACAAGGCGCTGGAGCAGACGTCGCTGTTTCCGCCGATGATGCGCCACATGATCGCCAGCGGTGAGCGCAG CGGCGAACTGGATGGCATGCTGACCCGCGCGGCGGACAATCAGGATCGCGAGTTCAGCGCCCAGATGACGCTGGCGCTGG GGTTGTTCGAACCGCTGCTGGTCGTCAGCATGGCCGGCATAGTGCTGTTTATCGTGCTGGCGATCCTCCAGCCGATTCTG CAGTTGAATACCCTGATGAGTATGTAG Protein sequence : MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEVTTRSGFSLSLRRSHRISASDLALLTRQLATL VAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSLAEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTLVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMGVSDAVRAYGPWVVLLLVLAVMG FRVLLRQEKHRLVFHRRLLFLPLIGRIARGLNTARYARTLSILNSSAVPLLQAMRISGDVLTNDYARFRLGQATDAVREG VSLHKALEQTSLFPPMMRHMIASGERSGELDGMLTRAADNQDREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPIL QLNTLMSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-77 | 57 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-76 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| outF | YP_003883931.1 | general secretion pathway protein F | VFG2049 | Protein | 7e-75 | 57 |
| outF | YP_003883931.1 | general secretion pathway protein F | VFG0181 | Protein | 7e-74 | 52 |
| outF | YP_003883931.1 | general secretion pathway protein F | VFG1870 | Protein | 7e-61 | 43 |
