Gene Information

Name : cbuC (Dda3937_03036)
Accession : YP_003883905.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : ferrichrysobactin transporter, permease; ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3362316 - 3363122 bp
Length : 807 bp
Strand : +
Note : -

DNA sequence :
GTGACACTGATGACACACCTTTTGCACGCCGAGCAATTAACGCTGGGCTACGACAACAAAATCATCGCCCGTGATCTGAG
CGTAGCGATCCCGGCCGGTAAATTCAGCGTGATCATCGGCCCCAACGCCTGCGGCAAATCTACCCTGCTGCGCGCGCTGT
GCCGCCTGCTGAAACCGATGGCGGGCGACGTATTGCTGGACGGCACCAGCATCCACCGCATTCCCACCAAAACGCTGGCC
CGGCGACTTGGGCTGTTGCCGCAGCACACCATCGTGCCGGACAACATCACCGTGATGGATCTGGTGGCGCGCGGGCGTTA
TCCGCACCAGACGCTGCTGCGCCAGTGGAGCGATGCGGATCAGACCGCGGTAGAACAGGCGATGGCGGCCACCAACGTCA
GCGAGCTGGCGGAGCGCAGCGTGGACGAGCTCTCCGGCGGCCAGCGCCAGCGGGTCTGGATCGCGATGGTGCTGGCGCAG
CAAACGCCGCTGTTGCTGCTGGACGAGCCCACCACCTGGCTGGATATCGCCCATCAGATCGACCTGCTGGACCTGTTCCG
CGAACTGAATCAGCAACACGACCGCACGCTGGTAGCGGTGCTGCACGACCTCAATCAGGCCTGCCGCTACGCCGATCACC
TGATCGTGATGCGCGCCGGCGCCGTGATGGCGCAAGGCGTGCCGGCCGACATCATCACCGCCGAACTGGTGCAAGAGGTG
TTCGGCATGGCCTGCGTCATCATCGACGACCCGGTCTCCCACACCCCGCTGATTGTGCCCTGCGGCCGCCATCACCCGGC
GCCTTAA

Protein sequence :
MTLMTHLLHAEQLTLGYDNKIIARDLSVAIPAGKFSVIIGPNACGKSTLLRALCRLLKPMAGDVLLDGTSIHRIPTKTLA
RRLGLLPQHTIVPDNITVMDLVARGRYPHQTLLRQWSDADQTAVEQAMAATNVSELAERSVDELSGGQRQRVWIAMVLAQ
QTPLLLLDEPTTWLDIAHQIDLLDLFRELNQQHDRTLVAVLHDLNQACRYADHLIVMRAGAVMAQGVPADIITAELVQEV
FGMACVIIDDPVSHTPLIVPCGRHHPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-67 56
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-67 56
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-67 54
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-67 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-64 52
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-55 51
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-66 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-66 50
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-56 46
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbuC YP_003883905.1 ferrichrysobactin transporter, permease; ATPase BAC0164 Protein 8e-56 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbuC YP_003883905.1 ferrichrysobactin transporter, permease; ATPase VFG0925 Protein 3e-82 61
cbuC YP_003883905.1 ferrichrysobactin transporter, permease; ATPase VFG1042 Protein 7e-56 51