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Name : virB4 (Dda3937_02753) Accession : YP_003883712.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Resistance Product : ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 3147941 - 3150721 bp Length : 2781 bp Strand : + Note : N-terminal region has similarity to VirB3, C-terminal region has similarity to VirB4 DNA sequence : TTGGCGCGTACTGGGCATCCTAGGGGAAAACCGATGACCACCCTGAATAAAGCGCTCACCCGGCCCGCCGCGATCATGGG CATCCCCCTCGTCCCGTTCGTTCTCGTCAGCGGGGCCATCCTCCTGCTGTCGGTTTACACCCGTTATTACCTTGCACTGC TGCTGATCCCGGCCTGGCTGGAAATGCGGGCGAAGGCCCGAGCCGATATCCATTATTTCGGGTTGTTATGGCTGGCGTTT AAAACCCGTGGCCGGTTTGCCACGAATCGCTATTTCGGTGCGACGGCGATGCTGGCAAGCCAGTATGACGCCGTCGATAT TTCGGAGTTTACCGACAAGATGAAATTAAACGCGCGCATCACGCTGGATAAATACATCCCTTACTCTTCCCACCTTCACC CGCACGTCATCAGAAACCGCCACGGTGATTTCGTCGCCTCCTGGGAGCTGGGCGGCACCGTGTTTGAATGTGAGGATGAA CATCACCTGACGCTGATGGCAAGCCATCTCAACAACCTGATCCGCTCGTATGAAGGGCTGCCGGTCACGTTCTATATTCA CCGAATACGGGAGACCTATCAGGATGCCTTCGAGGCGACCTCGGGTATTCCCTTTTCAGACGAGGTCGCAGCGCGCTATT ACCGGGCACTCAACGCGAAGCCGCTCTGGCGGCATCGGCTGTTTTTCACCGTCTGTTATGCACCCTTCTCCGCACTGGAG AAAAAGACCATGAAGACGCAGCCCGCCGGAAAGAGGAAAGCGGCGCTGGATGAGGCGCTGAAGGTCATGCTGGAGCACCA TGCCGCACTCGGCAGCGCACTGTCACGCTACATGGCGACCCCTTTGGGAACGTATGAGGAGAAAGGACGGGTCTACTCCT CGCAACTGGCGTTCTACCATCGCCTGATCACCGGCCAATGGCAGTCGGTGGCGGTGACACGTTCACCGTTTTACCTCACG CTCAGTACTCCGGATGTGTTTTTTACCACCGACACCGCCGAATGCCAGACCGTCGGCGGCTCCCGTTTCTTTCGCAGTCT GGAAATCAAGGACTATTCGCCGGAAACCGCGACCGGCCTGCTGGATGCGCTGTTGTATGCCAAAAGCGAATACGTACTGA CGCAGTCTTTCACCTGCATGGCGCGGGATGAAGCTCAAAATCATATCCGACTGGCGGAAAAACGGTTGAATGCAACCGAC GATGACGCCCTGTCACAGCGTGAAGAGCTGGTTGTCTTGCGCGATCTGCTCCAGTCCGGGCATGTGTCCTGCGGCAAATA CCATTTTTCCCTGCTGGTGTCCTCGGCCAGCGCCGAACAGGTGGTCAGGGAGACCCACGCGCTGGCCCAACCGTTTACCG ACCTCGGTATCATGACCTCGCTGTCCACGCTGTCGTTACCTGCGGCCTATCTGGCTCAACTGCCCGGCATGTATCCCTTT CGCCCCCGGCTGGTGGTCGTCAGCAGCCAGAATTACGCGGATCTGGGCAGCCTGCATAATTTTCACCCTCACAAACGTAG CGGCAACCCGTGGGGGGACGCCATCGCCATTCTGACATCGCCCGGCGGCGGAGGTTATTACCTGAACCTGCACGACAGCC AGGTCGGGCGGGATGACTTCAACGAGAAAACACCGGGGAATACCGCCATCATCGGCAAAACCGGCTCAGGGAAGACCCTG CTGATGACGATGATGCAACACCTGATGCAGAAGTACCGCCACCCGGCGACATTTTCCGCTGCGGCCCCCGGTAAACGGCT GACTACCGTTTACTTTGATAAAGACCGGGCCGCCGAGATGTCAATCCGCCAGATGGGCGGGCGTTACTTCCGCATCCGCA CCGGTACGCCTGCCGGGTTCAACCCGTTTTCACTGACGCCAACCCGACGCAACATCAGCTTTATCAAGCAATTGGTCCGC ATGTTGTGCCGTCGCAACGGCAAACCGCTCGACCCACGCGATGAAGCGCGCATCAGCGCCGCCGTGGATACCCTGATGCT GGACTACCCGCCGGAATTGCGCCGTTACGGTATAACCCGGCTGCTGGAGGTGTTGCCCGAACCGCCGACCCGCGAGGCCA GAACCAACGGGCTGCGCATCCGTCTGAAACAGTGGGCGCAGGGCGGCGAATTCGGCTGGATTTTCGATAACGCGGAGGAC AGCTTTAACATCGGCGAGAGCGATAACATCGGCATCGATGGAACGGAATTTCTGGATGACGACGATATTCGCGGCCCGAT CACCTTTTACCTGCTGTTCCGCGTCACCAGCCTGCTGGACGGTCGCCGGTTGGTGATGTTCATGGATGAATTCTGGAAAT GGCTGGCGGATGTCGAGTTTTCTAAATTCTCCCTCAATATGCTCAAGGTGATCCGCAAACTGAACGGCATTTTTATCCCC GCCACCCAGTCCCCCGATGAAATTGTCAGGCATCCGATTGCCCCGGCGATTATTGAGCAGTGCAGCACGCAAATCTTTCT CGCCAATCCCAAAGCCAGCCGGGCGGATTACGTGGAGAAAATGAACGTCCCCGACAGCGTGTATGACACCGTCCGTCGTC TGGACCCAGGCGAGCATTATATGGTCATCGTGAAAACACCGCTGCGCGCCGGTGAAACCCGGCCCTTTGTCGCCCTGGCA AGAATGGATTTATCGGGCATCGGCAACCTCACCACAATCCTGAGCGGAAGCGAAGACAACCTGAAACGGTTTGATGCGCT TTATCAGGAAGGGATGTCCCCTCAGGACTGGAAAGCGGCCTTCCTCGAACAGGCCATCTGA Protein sequence : MARTGHPRGKPMTTLNKALTRPAAIMGIPLVPFVLVSGAILLLSVYTRYYLALLLIPAWLEMRAKARADIHYFGLLWLAF KTRGRFATNRYFGATAMLASQYDAVDISEFTDKMKLNARITLDKYIPYSSHLHPHVIRNRHGDFVASWELGGTVFECEDE HHLTLMASHLNNLIRSYEGLPVTFYIHRIRETYQDAFEATSGIPFSDEVAARYYRALNAKPLWRHRLFFTVCYAPFSALE KKTMKTQPAGKRKAALDEALKVMLEHHAALGSALSRYMATPLGTYEEKGRVYSSQLAFYHRLITGQWQSVAVTRSPFYLT LSTPDVFFTTDTAECQTVGGSRFFRSLEIKDYSPETATGLLDALLYAKSEYVLTQSFTCMARDEAQNHIRLAEKRLNATD DDALSQREELVVLRDLLQSGHVSCGKYHFSLLVSSASAEQVVRETHALAQPFTDLGIMTSLSTLSLPAAYLAQLPGMYPF RPRLVVVSSQNYADLGSLHNFHPHKRSGNPWGDAIAILTSPGGGGYYLNLHDSQVGRDDFNEKTPGNTAIIGKTGSGKTL LMTMMQHLMQKYRHPATFSAAAPGKRLTTVYFDKDRAAEMSIRQMGGRYFRIRTGTPAGFNPFSLTPTRRNISFIKQLVR MLCRRNGKPLDPRDEARISAAVDTLMLDYPPELRRYGITRLLEVLPEPPTREARTNGLRIRLKQWAQGGEFGWIFDNAED SFNIGESDNIGIDGTEFLDDDDIRGPITFYLLFRVTSLLDGRRLVMFMDEFWKWLADVEFSKFSLNMLKVIRKLNGIFIP ATQSPDEIVRHPIAPAIIEQCSTQIFLANPKASRADYVEKMNVPDSVYDTVRRLDPGEHYMVIVKTPLRAGETRPFVALA RMDLSGIGNLTTILSGSEDNLKRFDALYQEGMSPQDWKAAFLEQAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70302.1 | Pilx3-4/VirB3-4-like protein | Not tested | HPI | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| virB4 | YP_003883712.1 | ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) | BAC0398 | Protein | 0.0 | 54 |
