Gene Information

Name : pykF (Dda3937_04619)
Accession : YP_003883469.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : pyruvate kinase I
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2898658 - 2900070 bp
Length : 1413 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAGACTAAAATCGTTTGTACCATCGGCCCGAAAACCGAATCAGAGGAAGTGCTGGGCAAACTGCTGAAAGCAGG
CATGAATGTGATGCGCCTGAACTTCTCTCACGGTGACTATGCCGAACATGGTCAACGTATCAAGAACTTACGCGCTATCA
CGGAAAAAACCGGCCTGAAAGCAGCGATCCTGCTGGATACCAAAGGCCCGGAAATCCGGACCATCAAGCTGGAAAACGGC
GCGGACGCCTCCCTGACTGCCGGTCAGACCTTCACTTTCACCACCGACCAGAGCGTCATCGGCAATAAAGAACGTGTGGC
GGTAACCTATGCCGGTTTTGCCAGCGACCTGAGCGTCGGCAACACCGTACTGGTCGACGATGGTCTGATCGGCATGGAAG
TCATTGAGATCAAAGGTGGCGAGGTTATCTGTAAGGTGCTGAACAACGGCGACCTGGGCGAAAACAAGGGCGTTAACCTG
CCGGGCGTTTCCATCCAGTTGCCGGCGCTGGCGGAAAAAGACAAGCGCGACCTGATTTTCGGCTGCGAACAAGGCGTCGA
TTTCGTAGCGGCGTCCTTTATCCGTAAACGTTCCGACGTGGAAGAGATCCGCGCTCACCTGAAACAGCACGGCGGCGAGC
ACATCCAGATCATCTCCAAGATCGAAAACCAGGAAGGTCTGAACAACTTCGACGACATTCTGGACGCCTCTGACGGCATT
ATGGTGGCGCGCGGCGACCTGGGCGTTGAGATCCCGGTTGAAGAAGTGATCTTCGCTCAGAAAATGATGATCGAAAAATG
CAACCAGGCCCGCAAAGTGGTGATCACCGCGACCCAGATGCTGGATTCAATGATCAAGAACCCGCGTCCGACCCGCGCCG
AAGCCGGTGACGTCGCCAACGCCATCATCGACGGTACCGACGCGGTGATGCTGTCCGGCGAGAGCGCCAAAGGCAAATAC
CCGCTGGAAGCGGTCAGCATTATGGCGACCATCTGCGAACGCACCGATAGAGTGATGACATCGCGTCTGGATAAACTGCA
AAGCAGCAGCAAACTGCGCATCACCGAAGCGGTGTGCCGTGGCGCGGTGGAAACTGCAGAGAAACTGGAAGCGCCGCTGA
TCGTCGTCGCCACCCACGGCGGCAAATCCGCCAAATCCATCCGTAAATACTTCCCGAATGCCCGCATTCTGGCGCTGACC
ACCAACGAAATCACCGCGCGTCAGCTGCTGCTGAGCAAAGGCGTGGAAACGATGCTGGTGAAAGAAATCGCGTCCACCGA
TGATTTCTACCGCATCGGTAAAGAAGCGGCGCTGAAGAGCGGCATGGCCCAGGAAGGCGACGTAGTGGTGATGGTTTCCG
GCGCGCTGGTGTCGAGTGGTACCACCAACACCTCTTCGGTACACCGCCTGTAA

Protein sequence :
MKKTKIVCTIGPKTESEEVLGKLLKAGMNVMRLNFSHGDYAEHGQRIKNLRAITEKTGLKAAILLDTKGPEIRTIKLENG
ADASLTAGQTFTFTTDQSVIGNKERVAVTYAGFASDLSVGNTVLVDDGLIGMEVIEIKGGEVICKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVEEIRAHLKQHGGEHIQIISKIENQEGLNNFDDILDASDGI
MVARGDLGVEIPVEEVIFAQKMMIEKCNQARKVVITATQMLDSMIKNPRPTRAEAGDVANAIIDGTDAVMLSGESAKGKY
PLEAVSIMATICERTDRVMTSRLDKLQSSSKLRITEAVCRGAVETAEKLEAPLIVVATHGGKSAKSIRKYFPNARILALT
TNEITARQLLLSKGVETMLVKEIASTDDFYRIGKEAALKSGMAQEGDVVVMVSGALVSSGTTNTSSVHRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_003883469.1 pyruvate kinase I VFG0479 Protein 0.0 87