Gene Information

Name : tpx (Dda3937_03134)
Accession : YP_003883386.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2809845 - 2810348 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAACAAATGTACATTTCCAGGGTAACCCGGTGCCGGTAGCAGGATCTTTCCCGGCGGCCGGCGGTAAAGCACCGGC
GTTTTCACTGGTTGCCAAAGACCTCTCTGACGTGGCGCTGAGCCACTACGCAGGCAAGCGCAAAGTCCTGAACATTTTCC
CGAGCATCGATACCGGCGTGTGCGCCGCGTCCGTGCGTAAATTCAATCAGTTGGCATCCAGCCTGGATAATACCGTCGTG
CTTTGCATTTCCGCCGACCTGCCGTTCGCCCAGTCCCGCTTCTGCGGCGCCGAAGGCCTGAACAATGTGGTGGTACTGTC
CACCCTGCGCGGCGCCGAATTCAATGAAAACTACGGTGTGGCGATTGCCGAAGGCGCGCTGAAAGGCCTGACTGCACGTG
CCGTCGTGGTGCTGGACGAAAACGACAACGTGCTGCACAGCGAGCTGGTGAACGAAATCACCACCGAACCGAACTACGAC
GCGGCTATCGCCGTACTGAAATAA

Protein sequence : 
MSTNVHFQGNPVPVAGSFPAAGGKAPAFSLVAKDLSDVALSHYAGKRKVLNIFPSIDTGVCAASVRKFNQLASSLDNTVV
LCISADLPFAQSRFCGAEGLNNVVVLSTLRGAEFNENYGVAIAEGALKGLTARAVVVLDENDNVLHSELVNEITTEPNYD
AAIAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 7e-37 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-37 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 5e-37 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-37 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003883386.1 lipid hydroperoxide peroxidase VFG0087 Protein 9e-38 50