|
Name : hrpY (Dda3937_03346) Accession : YP_003883236.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : LuxR family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 2647876 - 2648517 bp Length : 642 bp Strand : - Note : HrpY is a response regulator of a two component transcriptional regulatory system; E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response DNA sequence : ATGGATAGACTCATAAAGCTGATGATCGCTGACGATCACGTAATTATGCGTGAAGGATTAAAGCAGATCTTTGCATTAGA CGACAATCTGGAGGTGGTGGCGGAAGCCGGGACCGGGTCGCAGGTGCTGGCGCAATTGCGGGAGAGTCAGGTCGATTTAC TGCTGCTGGACATGAGCATGCCGGGCATTTGCGGCGAAGAGCTGATTATCCGTATCGTGGCGCAATATCCGCGTCTGCCG ATTCTGGTGTTGAGCATGTACAGCGAACCGCAGATCGCCCGTCGGGTGCTAAAAAGCGGGGCGCTCGGCTATATCACCAA AGACAAGGACCCGGAGGCGCTGTTGTCGGCTATCCGCCGGGTTGCGCAGGGGGCGCGCTATATCGACCACAGCATCGCCG AGCAGATTGTATTTGCGGATTGCCAGACCCGCGGCGACGGGCGTAATGAACTGCTGACCTCGCGGGAGCATCAGATCATG GTGATGCTGGCGCAGGGGTTGGGGGTCAATGCCATCGCCGAAATGCTGGCCATCAGCAACAAAACCGTCAGTACCCATAA ATCGCGATTAATGGAAAAAATGCAATTCACCACCAACGCGGACATTGTGAAATATGCATTGAGCCAGCGTTTAATCGCCT GA Protein sequence : MDRLIKLMIADDHVIMREGLKQIFALDDNLEVVAEAGTGSQVLAQLRESQVDLLLLDMSMPGICGEELIIRIVAQYPRLP ILVLSMYSEPQIARRVLKSGALGYITKDKDPEALLSAIRRVAQGARYIDHSIAEQIVFADCQTRGDGRNELLTSREHQIM VMLAQGLGVNAIAEMLAISNKTVSTHKSRLMEKMQFTTNADIVKYALSQRLIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpY | AAD24683.1 | response regulator HrpY | Virulence | Hrp PAI | Protein | 1e-73 | 73 |
