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Name : hrcJ (Dda3937_03342) Accession : YP_003883232.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2644763 - 2645473 bp Length : 711 bp Strand : - Note : E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response DNA sequence : GTGGAACTTCATCGCGGTCTTTCCGAAAACGATGCCAATGAAGTGATCGCCGCGCTGGGGGGATATCACATCGGGGCGGA AAAGCGCACGGAGAAAACCGGCGTCAGCATTCTGATTGATGTCAAAGACATGGAACGGGCGGTCAATATTCTCAACGCCG CGGGATTGCCCCGCCAGGCCCGCACCAATCTGGGCCAGGTGTTTCAGAAAACCGGTGTGATCTCGACGCCGTTGGAAGAG CGCGCCCGTTACATTTATGCCTTGTCTCAGGAAGTGGAATCCACACTCACGCAAATTGACGGCGTGCTGGTGGCCCGGGT TCATGTTGTGTTGCCTGAGCGTATTGCACCGGGGGAACCCATTCAACCGGCGTCCGCCGCGGTATTCATCAAATACCGGC CAGAGCTGGAGCCGGACAGTATCGAACCGCGCATCCGTCGCATGGTGGCCAGCAGTATTCCGGGGCTGGCCGGCAAGAGT GATAAAGACCTGGCCATCGTGTTTGTGCCGGCGGAGCCGTACAAAGACCATATCCCGACCGTGTCGCTGGGGCCGTTCCA ACTGACGCCGCAGACCATGACGCAACTGCAATGGCTGGCCGGCCTGTTGGCGTTGGCGCTGGCCGGGGTGCTGGGCTGGC GTTTCGGCAAGCCCTGGTGGGAACAACAGCGGGCGCGCAGGAAACCGGCGCAACCGGACGCGGGGGCCTGA Protein sequence : MELHRGLSENDANEVIAALGGYHIGAEKRTEKTGVSILIDVKDMERAVNILNAAGLPRQARTNLGQVFQKTGVISTPLEE RARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS DKDLAIVFVPAEPYKDHIPTVSLGPFQLTPQTMTQLQWLAGLLALALAGVLGWRFGKPWWEQQRARRKPAQPDAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 1e-71 | 77 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 2e-59 | 67 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 9e-60 | 66 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 3e-60 | 66 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 3e-60 | 66 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 1e-54 | 63 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 9e-55 | 63 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 2e-54 | 63 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 2e-54 | 63 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 2e-54 | 63 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 1e-54 | 63 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-27 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcJ | YP_003883232.1 | type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) | VFG0218 | Protein | 2e-28 | 43 |
