Gene Information

Name : hrpF (Dda3937_04210)
Accession : YP_003883225.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : HrpF protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2638681 - 2638908 bp
Length : 228 bp
Strand : -
Note : E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response

DNA sequence :
ATGTCTTCATCTTCACCTATTCAGCGCCGGTTGGACGGTGCGTTTGTCGATGCGCAGTCCCGGCTCGACGAGATGGCACT
GAACGTCTCGGAGGGAGAGGTCAGCGCGGCGGATAGCTATGCCTTTTATGAGGCCAGTATGGACTACTCGAACGCCAACT
GGGCCGCCGGGCAGATGCTGAGCGTCAAGCATGGTCTGGCAAAGGCCATCATCAATGACTTCAACTGA

Protein sequence :
MSSSSPIQRRLDGAFVDAQSRLDEMALNVSEGEVSAADSYAFYEASMDYSNANWAAGQMLSVKHGLAKAIINDFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpF AAB49177.1 HrpF Virulence Hrp PAI Protein 2e-15 63
hrpF ABA47305.1 HrpF Virulence S-PAI Protein 1e-07 45