Gene Information

Name : Dda3937_00050 (Dda3937_00050)
Accession : YP_003882543.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : ISEch10 OrfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1904764 - 1905048 bp
Length : 285 bp
Strand : -
Note : IS3/IS51 family

DNA sequence : 
ATGGGCACACCACGATTTACACCTGAATTTAAGGAAGAAGCCGTCCGGCAGATAACGGAACGCGGCTATTCCGTTGCCGA
AGTTTCCGACCGGCTGGGGGTTTCTGCACACAGTCTCTACAAGTGGCTGCGGGCTATCAGACCCGATAACAGCGAACAGC
ATGCCCGTGATCTCCTGGAAGCTAAAAGCGAGATCCTGAAACTCAGGGCCCAGTTGAAGCGCACCGAAGAAGAGCGGGAT
ATCCTGAAAAAGGCCGCGCGGTACTTTGCAAGGGAGCCCGACTGA

Protein sequence : 
MGTPRFTPEFKEEAVRQITERGYSVAEVSDRLGVSAHSLYKWLRAIRPDNSEQHARDLLEAKSEILKLRAQLKRTEEERD
ILKKAARYFAREPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 4e-27 70
unnamed AAF09021.1 unknown Not tested SHI-O Protein 5e-13 44
unnamed AAF09029.1 unknown Not tested SHI-O Protein 5e-13 44
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-12 43
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-12 43
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 7e-10 43
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 7e-10 43
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-12 42
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-12 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_00050 YP_003882543.1 ISEch10 OrfA VFG1707 Protein 1e-12 42