Gene Information

Name : yfeA (Dda3937_00376)
Accession : YP_003882482.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : manganese ABC transporter substrate-binding protein SitA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1846697 - 1847647 bp
Length : 951 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTACGGCCTTTCAGGGTTCTTTGAAAACAATGCGCAAAATGCGGTTATCCTTCCCGTTTCCCTTTTCCGCCGCTCC
GTTGCTAGCTGCCCTGCTGGCGCTGCTGTTCGGTTTTTCGCTACCGGCGACGGCAAAACTCAAGGTGGTTACCACCTTTA
CCATCATTCAGGATATCGCCCAACATGTTGCCGGTGATGCCGCCACCGTCGAATCGATCACCAAACCGGGTGCGGAAATC
CACGACTACCAGCCCACGCCGCGGGATATCGCCAAAACGCAGTCGGCAAACCTGATTTTGTGGAATGGCCTTAATCTGGA
GCGCTGGTTCGGCCGGTTCTTTGAAAACATTCAGGGCGTGCCTTCCGTGGTCGTCAGCGAAGGCGTCACGCCCATCGCGA
TCAACGAAGGCCCTTACAACGGCAACCCGAATCCCCACGCCTGGATGTCACCAAACAACGCATTAATTTATATAGAGAAT
ATCCGGGCAGCGCTGGTGAAATACGACCCGGACAACGCGGAAACCTATAACCGTAACGCCAAAAATTACGCCGCACAGAT
TATGGCGCTGGATCAACCGCTGCGGGCACGGCTGAATAATATTCCGGCCGAACACCGATGGCTGGTGACCAGCGAAGGCG
CCTTCAGCTATCTGGCGCGCGACTACGGCCTGAAAGAACTGTATCTGTGGCCAATCAACGCCGACGAACAAGGCACGCCG
CAGCAGGTGCGCCATGTTATTGATGAAGTGCGCCAGCACCAGATTCCGGTCGTGTTCAGTGAAAGCACGGTATCGGATAA
GCCGGCACGCCAGATCGGCAAAGAAACCGGCGCGCGCTATGGCGGCGTGCTGTATGTCGATTCGCTGTCGACCAAAGACG
GCCCGGTTCCCGACTACATTTCGCTGTTAAAAACCACCGTAGACACCATTGCAAAAGGCTTTAACCAATGA

Protein sequence : 
MFTAFQGSLKTMRKMRLSFPFPFSAAPLLAALLALLFGFSLPATAKLKVVTTFTIIQDIAQHVAGDAATVESITKPGAEI
HDYQPTPRDIAKTQSANLILWNGLNLERWFGRFFENIQGVPSVVVSEGVTPIAINEGPYNGNPNPHAWMSPNNALIYIEN
IRAALVKYDPDNAETYNRNAKNYAAQIMALDQPLRARLNNIPAEHRWLVTSEGAFSYLARDYGLKELYLWPINADEQGTP
QQVRHVIDEVRQHQIPVVFSESTVSDKPARQIGKETGARYGGVLYVDSLSTKDGPVPDYISLLKTTVDTIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-96 69
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-96 69
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-96 69
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-96 69
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 8e-97 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_003882482.1 manganese ABC transporter substrate-binding protein SitA BAC0439 Protein 3e-104 77
yfeA YP_003882482.1 manganese ABC transporter substrate-binding protein SitA BAC0349 Protein 5e-97 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_003882482.1 manganese ABC transporter substrate-binding protein SitA VFG0525 Protein 4e-97 69