Gene Information

Name : Dda3937_00816 (Dda3937_00816)
Accession : YP_003882235.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : SciI protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 1574819 - 1576297 bp
Length : 1479 bp
Strand : +
Note : -

DNA sequence :
ATGTCAATGGTTGAAGAACAGGCCCAGACAGGCGCGGCCGGTGGTTCATCGTCGCTGCTTGAAGAAATCATGGCGCAGGC
GCGCATCACCCCGGTGGATGAAGGTTATAACGTCGCCAAGCAAGGGATCGCCGCGCTGGTGGCCAACATTCTGGACAGCG
GTAACGCGGCCGAGCCGGTGAACAAGGCGCTGGTCGACAGCATGATCGTTGAGCTGGACAAGAAACTCAGCAAGCAGATC
GACGTGATTCTGCATGCGCAGGAACTGCAGGAGCTGGAATCCTCCTGGCGTTCGCTGAAACTGCTGATCGATCGCACCGA
TTTCCGCGAAAACATCAAAATCCTGCTGCTGCACGCCACCAAAAACGAGCTGCTGGAGGACTTTGAGTTCGCACCGGAAA
TCACCCAGTCCGGTTTCTACAAACACGTTTATTCCAGCGGCTACGGCCAGTTCGGCGGCCAGCCGATCGGCGGGGTGATC
GGCGATTACGCGCTGACCCAGAGTTCGCCGGACATCAAGCTGATGCAGTATGTCAGCGCGGTGGGCGCCATGGCGCACGC
GCCGTTCGTCTCCTCCGTCGCACCGACCTTCTTCGGCGTGGACAGCTTTACCGATCTGCCGTCCATCAAAGACCTGAAAT
CGGTGTTTGAAGGCCCGGCCTACACTAAATGGCGTTCGATGCGCGAGTCGGAAGATGCCCGTTATCTGGGCCTGACGGCG
CCGCGTTTCCTGGCTCGTCTGCCTTATGATCCGGTAGAAAACCCGATCAAAGGGTTTAATTACAAGGAAGACATCAGCGC
CAACCACGAACACTATCTGTGGGGCAACACCGCTTATCTGATGGGTACCGCCATCACCGACAGCTTCGCCAAGTACCGCT
GGTGCCCGAACATTATCGGCCCGCAGAGCGGCGGCGCCATCACCGATTTGCCGGTGCATGTCTATGAAGCGATGGGCCAG
TTGCAGGCCAAGATTCCGACCGAGGTGTTGATCACCGACCGCCGCGAATACGAAATGGCCGAAGAGGGTTTCATCACCCT
GACCATGCGTAAAGACAGCGACAACGCCGCGTTCTTCTCCGCCAACTCGGTGCAGAAACCCAAGGTATTCGCCAACACCA
AAGAAGGTAAAGAGGCGGAAACCAACTACAAACTGGGTACGCAGCTGCCGTACATGTTCATCATCAACCGTCTGGCGCAC
TACATCAAAGTATTGCAGCGCGAGCAGATCGGTTCCTGGAAAGAGCGTCAGGATCTGGAGCGCGAGCTGAATAACTGGAT
CAAGCAGTACGTCGCCGATCAGGAAAACCCGCCGGCAGACGTACGTAGCCGTCGCCCGCTGCGCGCCGCCCAGATCAAGG
TGCTGGACGTAGAAGGCGAACCGGGCTGGTATCAGGTGACCATGGCCGTGCGCCCGCACTTCAAATACATGGGGGCGAAC
TTTGAACTGTCCCTGGTTGGGCGTCTGGATAAGGAATAA

Protein sequence :
MSMVEEQAQTGAAGGSSSLLEEIMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI
DVILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKNELLEDFEFAPEITQSGFYKHVYSSGYGQFGGQPIGGVI
GDYALTQSSPDIKLMQYVSAVGAMAHAPFVSSVAPTFFGVDSFTDLPSIKDLKSVFEGPAYTKWRSMRESEDARYLGLTA
PRFLARLPYDPVENPIKGFNYKEDISANHEHYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ
LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-173 69
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-173 69
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 5e-148 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_00816 YP_003882235.1 SciI protein VFG2093 Protein 0.0 77
Dda3937_00816 YP_003882235.1 SciI protein VFG2475 Protein 1e-157 59