Gene Information

Name : Dda3937_02493 (Dda3937_02493)
Accession : YP_003882050.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : ISEch5 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1375527 - 1375985 bp
Length : 459 bp
Strand : +
Note : IS200 family

DNA sequence :
ATGGGGGACGAAAAGAGCTTAGCGCACACCCGCTGGAACTGTAAATATCACATAGTTTTCGCACCCAAATACCGAAGACA
GGTCTTCTACGGTGAGAAACGGCGGGTAGTAGGGAGTATCTTAAGAAAGCTGTGTGAATGGAAAAATGTGCAGATTCTGG
AGGCGGAGTGCTGTGCTGATCACATACATATGCTTGTGGAGATCCCGCCGAAGATGAGTGTATCGAGCGTCATGGGGTAT
CTGAAAGGCAAAAGCAGTCTGATGCTTTATGAACAATTTGGTGATCTGAAATTCAAATATAGGAACAGGGAGTTTTGGTG
CCGAGGGTATTATGTAGATACGGTGGGTAAAAATACCTCGAAGATCCGGGACTACATAAAGCATCAACTGGAGCAGGATA
AACTGGGCGAACAGTTATCAATCCCGTATCCAGGTAGCCCGTTTACGGGCCGTAAGTAA

Protein sequence :
MGDEKSLAHTRWNCKYHIVFAPKYRRQVFYGEKRRVVGSILRKLCEWKNVQILEAECCADHIHMLVEIPPKMSVSSVMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTSKIRDYIKHQLEQDKLGEQLSIPYPGSPFTGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-66 94
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 4e-42 65
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 6e-46 62
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-31 54
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 9e-32 54