Gene Information

Name : ybbA (Dda3937_01791)
Accession : YP_003882015.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Resistance
Product : transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1342249 - 1342935 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAACATTCTTGAAGTTCATCATCTTAGTAAGCACGTTGGTCAGGGGGAACATCAGCTCTCCATCCTCAC
CGGAGTTGAGCTGGTTGTCAAACCTGCGCAGACCATTGCGTTGGTGGGCGAATCCGGTTCGGGAAAATCCACCTTGCTGG
GAATTCTGGCCGGGCTGGATGACGGCAGCAGCGGACAGGTGTCGCTGCTCGGTCAGCAACTGGACCAACTGGACGAGGAA
GGACGGGCGGCGCTGCGGGCGAAGGACGTAGGATTCGTGTTCCAGTCCTTTATGCTGGTGCCTACGTTGACCGCTTTGGA
GAATGTGCAGTTACCGGCGTTGCTGCGCGGTGAAAGCGATCGCCAGAGCCGCCAGCAGGCGGAGCAACTGTTGCAGCAGC
TCGGTCTGGGCGCGCGGTTGCAGCATCTGCCGGCGCAGCTTTCCGGCGGCGAGCAGCAACGCGTGGCGCTGGCGCGCGCA
TTTAGCGGTCGCCCTCGGGTGCTGTTCGCCGATGAACCGACCGGCAACCTGGACCGCCATACCGGCGAGCGCATTGCCAA
CCTGTTGTTTTCCCTCAACCGTGACTTTGCCACCACCCTGATTCTGGTAACGCATGACGAGCAACTGGCGGCGCGCTGTG
AACGTTGCCTGCGGCTGCTCGACGGCAAACTGTGGGAGGACGCATGA

Protein sequence : 
MPAENILEVHHLSKHVGQGEHQLSILTGVELVVKPAQTIALVGESGSGKSTLLGILAGLDDGSSGQVSLLGQQLDQLDEE
GRAALRAKDVGFVFQSFMLVPTLTALENVQLPALLRGESDRQSRQQAEQLLQQLGLGARLQHLPAQLSGGEQQRVALARA
FSGRPRVLFADEPTGNLDRHTGERIANLLFSLNRDFATTLILVTHDEQLAARCERCLRLLDGKLWEDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-20 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-20 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-20 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_003882015.1 transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-21 46
ybbA YP_003882015.1 transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-23 44
ybbA YP_003882015.1 transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-22 41