Gene Information

Name : ribD (Dda3937_01955)
Accession : YP_003881916.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1231715 - 1232827 bp
Length : 1113 bp
Strand : +
Note : -

DNA sequence :
ATGGCTACATATTCTGATGAGTTTTACATGGCCCGCGCGCTGGAACTTGCTCGCCGCGGGCGCTTCACAACGTCGCCGAA
CCCGAACGTCGGGTGCGTGATCGTCAGAGATGACGAGATCGTGGGGGAAGGGTATCACCAGAAAGCGGGCGAACCGCATG
CGGAAGTGCATGCGTTGCGCATGGCGGGTGACAAGGCGCGCGGCGCCACGGCCTATGTGACGCTTGAACCGTGCAGTCAT
CACGGCCGCACGCCTCCGTGCGCCGATGCGCTGCTCGCGGCCGGCGTGGCGCGGGTCGTGGCGGCGATGCAGGACCCGAA
TCCGCAGGTGGCGGGGCGTGGCCTGCACCGCTTGCAGCAAGCCGGCATCGAGGTGCGTCACAGCGTGTTGATGGAACAGG
CGGAAAAAATTAACCGCGGCTTTCTGAAACGGATGCGCACCGGTTTCCCTTATGTGCAGCTTAAACTCGGCGCCTCACTG
GATGGCCGTACGGCGATGGCGTCCGGTGAAAGCCAGTGGATCACCTCGCAGCAGTCACGCCAGGATGTACAGCGTTTCCG
GGCGCAGAGTTCGGCTATTCTCAGCAGCAGCGCCACCGTGCTGGCGGATGATCCGTCGCTGACCGTACGCTGGTCGGAAC
TGGATGCGGATACCCAGCGATTCTATCCTGAAAGCGCCGTGCGCCAGCCGGTGCGCGTGATTGTCGATAGCCAGTCGCGC
GTGACTCCGCAGCATCGTCTGATAAGCCAGCCGGGGCAAACCTGGCTGGCGCGTTCGCGTCAGGATGGTCAGCCATGGCC
GGACGGCGTAGAGCAACTGGATATGCCGCTGCACGGCGGCGGCATCGATCTGGTCGCGCTGATGATGACGCTGGGCAAAC
GCCAGATCAATACGGTGTGGGTGGAAGCGGGCCCCCGTCTGGCAGGCGCGTTGCTGCAGGCCGGCGTGGTGGATGAACTG
ATTGTTTATCTCGCGCCCAAATTATTGGGGGACGCGGCCCGGCCGCTGTGCGTGCTGCCGGGATTGGAACAGTTGTCGCA
GGCGCCCGCGTTTGCGATGACGGACGTCTGTCAGGTGGGGCCGGATCTCCGCCTGACGCTGAAGCCGCAATAA

Protein sequence :
MATYSDEFYMARALELARRGRFTTSPNPNVGCVIVRDDEIVGEGYHQKAGEPHAEVHALRMAGDKARGATAYVTLEPCSH
HGRTPPCADALLAAGVARVVAAMQDPNPQVAGRGLHRLQQAGIEVRHSVLMEQAEKINRGFLKRMRTGFPYVQLKLGASL
DGRTAMASGESQWITSQQSRQDVQRFRAQSSAILSSSATVLADDPSLTVRWSELDADTQRFYPESAVRQPVRVIVDSQSR
VTPQHRLISQPGQTWLARSRQDGQPWPDGVEQLDMPLHGGGIDLVALMMTLGKRQINTVWVEAGPRLAGALLQAGVVDEL
IVYLAPKLLGDAARPLCVLPGLEQLSQAPAFAMTDVCQVGPDLRLTLKPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-67 50
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-67 50