Gene Information

Name : mutS (Dda3937_01899)
Accession : YP_003881859.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : methyl-directed mismatch repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1165586 - 1168144 bp
Length : 2559 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACACCAGAGAGTTTAGACGCCCACACCCCCATGATGCAGCAGTACCTGAAGCTGAAAGCCCAGCATCCCGATAT
TCTGCTGTTTTACCGCATGGGCGACTTCTATGAGCTGTTTTATGACGATGCCAGGCGCGCGTCGCAATTGCTGGATATCT
CGCTGACCAAACGCGGCGCTTCCGCCGGCGAACCGATTCCGATGGCCGGTGTCCCTCATCATGCAGTAGAAAACTATCTG
GCCAAACTGGTGCAGTTGGGTGAATCGGTCGCAATTTGTGAACAGATTGGCGACCCGGCCACCAGCAAGGGGCCGGTAGA
ACGCAAAGTGGTGCGCATCGTCACCCCCGGCACCATCAGTGATGAAGCGCTGTTACAGGAAAAGCAGGATAACCTGCTGG
CCGCCGTCTGGCAGGAAGGCCGGGGATTCGGCTACGCCACGCTGGATATCAGTTCCGGCCGTTTCCGGCTGGTGGAGCCG
GTTGACCGGGAAACCATGGCGGCGGAATTGCAGCGCACCAATCCGGCGGAATTGCTCTATCCGGAAACCTTTGAGGCGAT
GTCCCTGATTGAACATCGCCACGGGCTGCGCCGCCGTCCGCTGTGGGAGTTCGAACTGGACACCGCCCGCCAGCAGTTAA
ATCTACAATTCGGCACCCGCGACCTGACCGGTTTCGGCGTAGAACAGGCGCACATGGGGCTGCGTGCCGCCGGTTGTCTG
TTGCAATACGCCAAAGATACCCAACGAACCTCGCTGCCGCATATCCGCAGCATCACCGTGGAACGCCAGCAAGACGGCAT
CATCATGGATGCGGCGACGCGCCGTAATCTGGAACTGACCCAGAACCTGTCCGGCAGCGGTGAAAATACCCTGGCTTCAG
TACTGGACCGTACCGTGACGCCAATGGGCAGCCGTATGCTTAAGCGCTGGTTGCATGCGCCGATTCGTGACGCTCAGGCG
CTGCTGCGGCGCCAGCAGGCCATCGGCGCACTGCGGGATGTGGCAGCCGAGCTGCAGCCGTATCTGCGTCAGGTGGGCGA
TCTGGAGCGAATTCTGGCGCGTCTGGCGCTGCGTTCGGCGCGTCCGCGCGATCTGGCCAGAATGCGTCATGCCTTTCAGC
AACTGCCGGATATTCACGTGTTGCTGGAAACAGTCGGCGCTGAAGCGGTACAACAACTGCGCACCCAGGTCGGGCAGTTT
GATGAGCTGCGCGACCTGCTGGAACGCGCGGTGGTGGAAGCGCCGCCGGTGTTGGTGCGCGATGGCGGCGTCATCGCCGG
CGGCTACAACGACGAGCTGGATGAGTGGCGTATGCTGGCCGACGGCGCCAGCGACTATCTGGAAAAACTGGAAATCCGCG
AACGCGACCGGCTCGGTATCGATACCCTGAAAGTCGGGTTCAACGGCGTGCACGGTTACTACATTCAGGTCAGCCGCGGG
CAGAGCCATCTGGTGCCGATGAATTATGTACGCCGCCAGACGCTGAAAAACGCCGAGCGCTACATCATCCCCGAACTGAA
AGAATACGAAGACAAGGTACTAACCTCAAAAGGCAAGGCGCTGGCGCTGGAAAAAGCCCTGTACGAAGAATTGTTCGACC
TGCTGCTGCCGCATCTGGCGGACCTACAGCAAAGCGCCGGCGCGCTGGCGGAACTGGATGTCCTGACCAATCTGGCCGAG
CGCGCCGACACGCTGAACTACGTCTGCCCCACCCTCAGCGACAAACCGGGGATCAGGATTACCGGCGGCCGCCACCCGGT
GGTGGAACAGGTACTGAGCGAACCCTTTATCGCCAACCCGCTGTCGCTGTCGCCTCAGCGCCGGCTGCTGATCATCACCG
GCCCCAATATGGGCGGGAAAAGCACCTACATGCGCCAGGCGGCGCTGATTGTATTGATGGCGCATATCGGCAGCTACGTC
CCGGCCGAGCAGGCGGTGATTGGCCCGGTGGACCGGATCTTTACCCGTGTCGGCGCAGCCGATGACCTGGCCTCCGGTCG
CTCAACCTTCATGGTGGAAATGACGGAAACCGCCAATATTCTGCATAACGCCACCGAACAGAGTCTGGTGTTGATGGATG
AAATCGGACGCGGCACCTCGACTTACGACGGTCTGTCGCTGGCCTGGGCCTGCGCTGAAGCGCTGGCGAACAAAATCAAG
GCCATGACCCTGTTCGCCACGCACTATTTCGAGCTCACCAACCTGCCGGAAAAAATGGAAGGCGTGATCAACATCCATCT
CGACGCACTGGAGCATGGCGACACCATCGCCTTTATGCACAGCGTGCAGGAAGGCGCGGCCAGCAAGAGTTACGGGCTGG
CCGTGGCGGCGCTGGCCGGCGTGCCGAAAGAAGTTATCAAGCGGGCAAGACAAAAGCTGAAAGAACTGGAGTCACTGGCA
GGCCACGCTTCGGCCAGCCATGTCGACGGCTCGCAGCTCGCGTTGCTAGCGCCGGAAGAACCGTCGCCGGCGCTGGACGC
GCTGGAAGCCATCGACCCGGATGCGCTAACGCCGCGTCAGGCGCTGGACTGGCTGTATAAGCTGAAAGGAATGATGTAA

Protein sequence :
MSTPESLDAHTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDARRASQLLDISLTKRGASAGEPIPMAGVPHHAVENYL
AKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQEKQDNLLAAVWQEGRGFGYATLDISSGRFRLVEP
VDRETMAAELQRTNPAELLYPETFEAMSLIEHRHGLRRRPLWEFELDTARQQLNLQFGTRDLTGFGVEQAHMGLRAAGCL
LQYAKDTQRTSLPHIRSITVERQQDGIIMDAATRRNLELTQNLSGSGENTLASVLDRTVTPMGSRMLKRWLHAPIRDAQA
LLRRQQAIGALRDVAAELQPYLRQVGDLERILARLALRSARPRDLARMRHAFQQLPDIHVLLETVGAEAVQQLRTQVGQF
DELRDLLERAVVEAPPVLVRDGGVIAGGYNDELDEWRMLADGASDYLEKLEIRERDRLGIDTLKVGFNGVHGYYIQVSRG
QSHLVPMNYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYEELFDLLLPHLADLQQSAGALAELDVLTNLAE
RADTLNYVCPTLSDKPGIRITGGRHPVVEQVLSEPFIANPLSLSPQRRLLIITGPNMGGKSTYMRQAALIVLMAHIGSYV
PAEQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAEALANKIK
AMTLFATHYFELTNLPEKMEGVINIHLDALEHGDTIAFMHSVQEGAASKSYGLAVAALAGVPKEVIKRARQKLKELESLA
GHASASHVDGSQLALLAPEEPSPALDALEAIDPDALTPRQALDWLYKLKGMM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_003881859.1 methyl-directed mismatch repair protein VFG0562 Protein 0.0 84