Gene Information

Name : Dda3937_01475 (Dda3937_01475)
Accession : YP_003881754.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : IncI1 plasmid conjugative transfer protein TraF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1045460 - 1046707 bp
Length : 1248 bp
Strand : -
Note : -

DNA sequence :
ATGCATAAAAAATCACTCGTCCGCGCCATGACGGTAGCGGGTCTGTTTTCTCCTGCCATAACCTTTGCCGCCGGAACCTG
GTCGGATGCCAGGAACGATGCCATGGGCGGAACCGGGGTCGCTTCATCGCACTATGGCTCCGCCGCGCTGGCCAACCCGG
CGCTGCTGACCAAAGCGCAAGCCAGCGACAACGTCAGCTTAATCCTGCCGTCGGTAGGCGTGGTGGTGTCCGACCCTGAA
AAAGTCGAAGATAAGTTTGACCGCATCAAAAACAGTTGGGATAGCATCAAAGACGTGCTGAATTCCAGCAGCGGTATCAC
CAATCCGCTGCTGCGTCGGCTGGCGCTGCAACAGGGCATCTCCTCCTTCCAGTCGCTGAGAAGCGATCTGAATAGCATCA
ATGATGACCGTGCTTACGGCGATGCCGCCGCCGCTACCGTGGTGGCGGTTCCCAACGAAACGTTGCCTTTCGCCGTCGTC
GTCAAAGGCTGGGGCGTGGCGAATGCCAAAGCCGTGGTGACCGACCGCGATCTGGCTTATCTGGATAGCGTGGCGGCGGG
CACCACCATTCCGACGTCGGCCGACCTGAACAATTTCACCTCCCGGGCCGAGGGTGCAGGCGCGCTGGTGACCGAATACG
GCGTAGCGATGGCGAAAGCGTTCAGCATCGCCGGTCAACCGGTTTCCGTGGGTATCACCCCCAAACTGCAACGGATCGAC
ACCTATAACTATATTGCGTCGATCAATAACTACAGTTCTTCTGATTTCCGCAATTCGGAATTCAAGAAATCCAGCTCCGG
CGCCAACCTGGATCTCGGTTTCAGTACTGATCTAACCTCGCGCTGGAGCGCCGGGCTGGTGGCGCAGAACCTGATTGGCC
GCCGCATCGACACCAAAGAGGTGCAGGGCATACAGCGAACCTTCCACCTTCGGCCGCAGGTCACCGCGGGCACCGCCTGG
AGCACGGACGCACTGACGCTGGCCACCGATATCGACCTGACGCCCGCCAGCGGTTTTGATTCCGAGAAGAAAAACCAGTA
CGCCGGAGTGGGAGCGGAATACCGCGTGCTGTCCTGGGCGCAGTTGCGCGTCGGTTACCGCGCCAACATGCGCGACAGCG
ACAAGAATCTGGTTACCGCCGGTCTCGGTCTGTCGCCGTTTGGCGTACACCTTGACCTGACCGGCATGGTCGGCACCGAA
AGCAAACACACCTACGGCGCCGCCGCCAAACTGAGTTTTACCTTCTGA

Protein sequence :
MHKKSLVRAMTVAGLFSPAITFAAGTWSDARNDAMGGTGVASSHYGSAALANPALLTKAQASDNVSLILPSVGVVVSDPE
KVEDKFDRIKNSWDSIKDVLNSSSGITNPLLRRLALQQGISSFQSLRSDLNSINDDRAYGDAAAATVVAVPNETLPFAVV
VKGWGVANAKAVVTDRDLAYLDSVAAGTTIPTSADLNNFTSRAEGAGALVTEYGVAMAKAFSIAGQPVSVGITPKLQRID
TYNYIASINNYSSSDFRNSEFKKSSSGANLDLGFSTDLTSRWSAGLVAQNLIGRRIDTKEVQGIQRTFHLRPQVTAGTAW
STDALTLATDIDLTPASGFDSEKKNQYAGVGAEYRVLSWAQLRVGYRANMRDSDKNLVTAGLGLSPFGVHLDLTGMVGTE
SKHTYGAAAKLSFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 1e-54 42