Gene Information

Name : SP670_1936 (SP670_1936)
Accession : YP_003880088.1
Strain : Streptococcus pneumoniae 670-6B
Genome accession: NC_014498
Putative virulence/resistance : Resistance
Product : choline transport ATP-binding protein opuBA
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1805016 - 1805744 bp
Length : 729 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGAATACAAAAATGTAGCACTGCGCTACACAGAAAAGGATGTCTTGAGAGATGTCAACTTACAGATTGAGGATGG
GGAATTTATGGTTTTAGTAGGGCCTTCTGGGTCAGGTAAGACGACCATGCTCAAGATGATTAACCGTCTTTTGGAACCAA
CTGATGGAAATATTTATATGGATGGGAAGCGCATCAAAGACTATGATGAGCGTGAACTTCGTCTTTCTACTGGTTATGTT
TTACAGGCTATTGCTCTTTTTCCAAATCTAACAGTTGCGGAAAATATTGCTCTCATTCCTGAAATGAAGGGGTGGAGCAA
GGAAGAAATTACGAAGAAAACAGAAGAGCTTTTGGCTAAGGTTGGTTTACCAGTAGCCGAGTATGGGCATCGCTTACCTA
GTGAATTATCTGGTGGAGAACAGCAACGGGTCGGTATTGTCCGAGCTATGATTGGTCAGCCCAAGATTTTCCTCATGGAT
GAACCCTTTTCGGCCTTGGATGCTATTTCGAGAAAACAGTTGCAGGTTCTGACAAAAGAATTGCATAAAGAGTTTGGGAT
GACAACGATTTTTGTAACCCATGATACGGATGAAGCCTTGAAGTTGGCGGACCGTATTGCTGTCTTGCAGGATGGAGAAA
TTCGCCAGGTAGCGAATCCCGAGACAATTTTAAAAGTGCCTGCAACAGACTTTGTAGCAGACTTGTTTGGAGGTAGTGTT
CATGACTAA

Protein sequence : 
MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYMDGKRIKDYDERELRLSTGYV
LQAIALFPNLTVAENIALIPEMKGWSKEEITKKTEELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMD
EPFSALDAISRKQLQVLTKELHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKVPATDFVADLFGGSV
HD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-40 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SP670_1936 YP_003880088.1 choline transport ATP-binding protein opuBA NC_012469.1.7686878. Protein 2e-24 41