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Name : SPAP_0880 (SPAP_0880) Accession : YP_003876471.1 Strain : Streptococcus pneumoniae AP200 Genome accession: NC_014494 Putative virulence/resistance : Virulence Product : type IV secretory pathway, VirB4 component Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 828829 - 831252 bp Length : 2424 bp Strand : + Note : Operon 393 Gene 6 COG3451 Type IV secretory pathway, VirB4 components DNA sequence : TTGAAGCAAAGAAAAAAGCAAATCAGCGACTTAAATCTAAGGGAAAAACAATTAAAAAAAGACCGAAAGGAAGTAAGAAG GCTAAAAACAAAGAAAGATCCAACAAATAGTCTTCTTAGTGTACTTTTAAAGAAAGAGAAAAAGAGATTTACAGTTGAGG ATACTATTCCATATATAAGAATGTTACCAGAGGGCATTTGCCAGTTAGATGAAAAAAACTATTCAAAGACAATTTCATTT CAAGATATAAATTACCAGTTGGCATTGGAAGAAGATAGAGATTTAATCTTTAACCAATTTGCCAACTTTTTAAATTCTTT TGATCCAAGTGTCCACATTGAACTTTCGTATGTAAATCAATTAGGAAGAAATAAAGACCTACAAGATGCAATTAAAATAG CTGATAAGGGAGACTTTTATGACGATGTAAGAAAAGAGTTTAGGGAGATGTTAAAGCTCCAACTTGCAAAGGGGAATAAC GGACTTAAAAAGATGAAGTATATAACATTTACAACAGAAGCCGATAACCTAGAGCAAGCAAGGGCAAAGTTAAATAGACT TGAAGTGGATATTTTATCTAACTTTAAATCTATGGGAGTAAGAGCAGAAAGTCTTGATGGCGAAGAAAGATTAAGACTTG TTCACGATATGTTAAATCCAGACAAGAACTTTGATTTTTCATATAAAGATTTGAAGAAGAAAGAGTCTACAAAATCACAT ATAACTCCAAATATCTTTAATTTTGCACCAGCAAATAATTTTAAATTTGGGAAATTCATTGGAGCAGTAAGCCATTTTCA AATACTTGCAAGTGAGTTATCAGACAGAATGTTATCTGAGTTTTTAGATATTGATGACAATATTTATGTAGCTTTTCATA TAGATGTAGTTGAACAAGCAGAAGCTATTAAACTCATCAAGAGAAAAAACACAGACCTGGATAGAATGAAAATCGAAGAA CAAAAGAAAGCAGTTCGAGCAGGATATGATATGGATATTATCCCTTCAGATATAAATACTTTTGGGGCTGATGTTAAGTC CATGTTATCTGACTTACAAAATAGAGATGAAAGGCTCTTTGTAGTTACCATAGTAATGATGAATTTTGCAAGGACTAATC AAAAATTAGAAAATACAATTGCTCAAATTTCATCAATTGCAAACAGACATAATTGTCAGGTAAAAAGATTATCCCATCAA CAAGAACAGGGACTTGTTTCTGTCTTACCTCTAGGAGTTAACCAAGTTGAGATAAAAAGATTTTTAACTTCATCATCAAC GGCAGTATTTATGCCTTTTACAACAGAAGAGCTATTTATCGATTCGGCAAATTCTTTGTACTATGGCTTAAACGCCCTTA GCCAAAACTTGATTATGGCAGATAGAAAGAAACTAAAGAACCCTAACGGATTAATATTAGGTACACCAGGTTCTGGTAAA TCTTTTTCGGCAAAGAGAGAGATGGCAAATGCAATTCTTGTAACAGATGATGATGTAATCATTTGTGATCCTGAGGGCGA GTATTCAAACCTTGTAAAACAATTTAATGGAGAAGTTATTAAAGTTTCAGCAAAGTCAAAGGACTATCTAAATCCACTAG ATATTAATATGAACTATGGAGATGGGGACGCACCTTTAAAGGATAAGGCAAACTTCATAATGTCTATGCTTGAACTTGTA GTAGGAGGTTCTGGTCTTACTGCTGCAGAAAAATCTGTTATAGATAGGTGCTTACCAAAGATATACCAAAAATATTTTGA AGACCCAAAACCAGAAAATATGCCAATATTAGGAGATTTATACGATATGCTCCTATCTCAAGAAGAGGGAGTTGGTAGAA AACTAGCAACAGAAATGGAAATTTATGTTAAAGGAAGTCTTAATGTATTTAATAACAGGTCAAATGTTGACCTAAATAGG CAACTGCTCTGTTTTGATATAAAAGAGCTAGGAACACAACTTAAAAAAATAGGTATGCTTGTAATTCAAGACCAAGTTTG GAACAAGGTTTCCCTAAATAGAGGTAGCAAGTCTACAAGATACTATATAGATGAGTTCCACCTTTTATTAAAAGATCCAC AAACTGCTTCATATTCAGTAGAAATCTGGAAAAGATTTAGAAAATGGGGTGGTATTCCAACAGGCATAACTCAAAACGTA AAAGACCTTTTAACAAGTCAGGAAATTGAAAATATCTTTGATAATACAGACTTTGTTCTAATGTTAAATCAAGCATCTGG AGATAGAGATATTCTTGCTAAGAAATTAAAAATATCGCCTTATCAGCTAAACTATATTACTAACTCAAATGCAGGTGAGG GACTATTATTCTTTGGAAATACTATTGTTCCCTTTATAGATAAATTCCCTAAAGACACCATGTTATATAAGCTAATGACA ACAAAACCAGAAGAAGCTAAGTAG Protein sequence : MKQRKKQISDLNLREKQLKKDRKEVRRLKTKKDPTNSLLSVLLKKEKKRFTVEDTIPYIRMLPEGICQLDEKNYSKTISF QDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQLGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNN GLKKMKYITFTTEADNLEQARAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKNFDFSYKDLKKKESTKSH ITPNIFNFAPANNFKFGKFIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVEQAEAIKLIKRKNTDLDRMKIEE QKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDERLFVVTIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQ QEQGLVSVLPLGVNQVEIKRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNPNGLILGTPGSGK SFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELV VGGSGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPILGDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNR QLLCFDIKELGTQLKKIGMLVIQDQVWNKVSLNRGSKSTRYYIDEFHLLLKDPQTASYSVEIWKRFRKWGGIPTGITQNV KDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLLFFGNTIVPFIDKFPKDTMLYKLMT TKPEEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2320 | NP_815976.1 | traE protein | Not tested | Not named | Protein | 0.0 | 60 |
| EFAU085_00716 | YP_008394240.1 | Type IV secretory pathway, VirB4 component | Virulence | Not named | Protein | 0.0 | 54 |
