Gene Information

Name : STHERM_c05950 (STHERM_c05950)
Accession : YP_003873828.1
Strain : Spirochaeta thermophila DSM 6192
Genome accession: NC_014484
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 673654 - 674730 bp
Length : 1077 bp
Strand : -
Note : OTCase

DNA sequence :
ATGGGGGTCCACCCCCTCCTTGCCTTCTTAGGGAAAACCGGGCTACTCTTGTGGGTATCTTTTTCCGGCAGGAGGAGGGA
ACCCATGGGGGTCAACCTTGCAGGACGTTCGTTCCTCTCGCTCTTCGACTTTACGCCCGAGGAGATCCGGTATCTCCTCC
GGCTCTCGCACGAGCTCAAAGGGTTGCGCAGGGCGGGGGTGAGGAGACGACTCCTGGAGGGGCGACACGTGGTCCTCATC
TTCGAGAAGACCTCCACGAGGACGCGCTGCGCCTTCGAGGTGGCGGCTGCGGACGAGGGGGCGCATGTGACGTTCCTCAC
CAACAGCCAGCTCGGCAAGAAGGAGTCGCTCGAGGATACGGCGCGGGTGCTCGGCAGGTTCTACGATGGGATCGGCTTCA
GGGGGTATGCCCAGGAGACGGTGGAGGCGCTCGCCCGCTACTCCGGGGTTCCAGTGTGGAACGGGCTCACCGATGAGTGC
CACCCCACGCAGGCCCTCGCCGATGTGATGACCATAGAGGAATACGTCCGCAAGCCACTCTCGCAGGTGAGGCTGGTCTT
CGTAGGGGATGCCCGGAACAACGTGGCCCGCTCCCTGCTGGTGATCTCGGCCAAGCTCGGGATGCACTTCGTGGCGGTCT
GTCCTCCTGCCCTCTCTCCGGATGAGGAGTTTCTCGCACGGGCAGAGGAGGTGGCGCGGGGGACCGGGGCCCGTATCGAG
ATCACCGATGACCTCGATGGGGTTGAGGGGGCGGATGCCCTCTACACGGATGTGTGGGTCTCCATGGGCGAGGAGGACAG
GTTGGAGGAGCGGATCCGGCTCCTCGAGCCGTACAGGGTCGATATGGCCCTCGTAGAGCGGACGGGGAATCCCGAGGTGC
TCTTCCTCCATTGCCTCCCTTCGTTCCACGATACGAATACCGAGATGGGGCGGCTGGTGTACGAGCGTTTCGGCATAAAG
GAGATGGAGGTCTCCGACGAGGTCTTCAGGAGCCGGCACTCGGTGGTGTTCGAGGAGGCGGAGAATCGGCTCCACACCAT
CAAGGCGGTGATGCTCGCCACCCTGGGGGCGGTGTAG

Protein sequence :
MGVHPLLAFLGKTGLLLWVSFSGRRREPMGVNLAGRSFLSLFDFTPEEIRYLLRLSHELKGLRRAGVRRRLLEGRHVVLI
FEKTSTRTRCAFEVAAADEGAHVTFLTNSQLGKKESLEDTARVLGRFYDGIGFRGYAQETVEALARYSGVPVWNGLTDEC
HPTQALADVMTIEEYVRKPLSQVRLVFVGDARNNVARSLLVISAKLGMHFVAVCPPALSPDEEFLARAEEVARGTGARIE
ITDDLDGVEGADALYTDVWVSMGEEDRLEERIRLLEPYRVDMALVERTGNPEVLFLHCLPSFHDTNTEMGRLVYERFGIK
EMEVSDEVFRSRHSVVFEEAENRLHTIKAVMLATLGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-82 59
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-84 57
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-84 57
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-84 57
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-84 57
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-84 57
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-84 57