Gene Information

Name : STHERM_c22460 (STHERM_c22460)
Accession : YP_003875441.1
Strain : Spirochaeta thermophila DSM 6192
Genome accession: NC_014484
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2460035 - 2460712 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCTCGTAGAGCTTTACGAGGTGCACAAGGACTATCACCTTGGAAGGACGGTGGTGCATGCACTGAGGGGAGTGAG
TCTGGAGATCGCCCAGGGGGAGTTCGTGGCCCTGATGGGTCCCTCCGGATGCGGGAAGACCACCCTTCTCAACATCGTGG
GGTGTATCGATAGACCCACCTCGGGACGTGTGTTGTTTGACGGCACCGACGTGGCGGGGCTCTCGGACGACGAGGAGGCT
CGGATGAGGAGGGAGCACATAGGATTCATCTTTCAGAGTTTCAACCTCATACCGGTGCTCACCGTGGCGGAGAACGTGGA
GATCCCCCTCGTGCTCAAGAGACGGCCGAGGGATGAGAGGAAGAGGAGGGTCGAGGAGCTCCTCGCCCTCGTGGGACTTT
CCGAGTACGCTTCCCACCGGCCGGACGAGCTTTCTGGGGGACAGCGGCAGCGGGTGGCGATCGCCAGGGCGCTCGTCCAC
AACCCCCGTCTCGTCATCGCAGACGAGCCCACGGCCAATCTCGATTCCGAGACCGGAAAGGGGATTCTCGAAGAGATGCG
TCGCCTCAATCGGGAGGAGGGGGTCACCTTCATCTTTTCGACGCATGACCACGAGACCATGCGGTTCGCGGAAAGGGTCG
TTCACCTGAAGGACGGGAGGATCCACGATGTTCCTTAA

Protein sequence : 
MALVELYEVHKDYHLGRTVVHALRGVSLEIAQGEFVALMGPSGCGKTTLLNIVGCIDRPTSGRVLFDGTDVAGLSDDEEA
RMRREHIGFIFQSFNLIPVLTVAENVEIPLVLKRRPRDERKRRVEELLALVGLSEYASHRPDELSGGQRQRVAIARALVH
NPRLVIADEPTANLDSETGKGILEEMRRLNREEGVTFIFSTHDHETMRFAERVVHLKDGRIHDVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STHERM_c22460 YP_003875441.1 transporter NC_008702.1.4606598. Protein 8e-40 52
STHERM_c22460 YP_003875441.1 transporter NC_012469.1.7686878. Protein 4e-41 46
STHERM_c22460 YP_003875441.1 transporter CP001581.1.gene798.p Protein 4e-38 43
STHERM_c22460 YP_003875441.1 transporter NC_012469.1.7686946. Protein 1e-21 42