Gene Information

Name : STHERM_c19340 (STHERM_c19340)
Accession : YP_003875142.1
Strain : Spirochaeta thermophila DSM 6192
Genome accession: NC_014484
Putative virulence/resistance : Resistance
Product : transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2122057 - 2122848 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGATGGACGAGGTCATCCGCCTCGAGGGCGTCACCAAGACGTACACCATGGGCGAAGTGGAGGTGCAGGCCCTCAGGGG
CATATGGCTCACCGTCCGGCGCAACGAGTTCGTGGCCATCATGGGGGCGAGCGGGTCGGGCAAGTCCACGCTCATGAACA
TCGTGGGTTGTCTCGACAGGCCTACCTCGGGGACCTACTACCTTGAAGGGGAGGATGTCTCCACCCTCACGGACGACCAG
CTCGCCGACGTGAGGGGAAGGAAGGTGGGGTTCGTGTTCCAGACCTTCAACCTCCTTCCCCGGATGACGGCGCTCAAGAA
CGTGGAGCTCCCTCTGGTATACGCCGGCATCCCCGAGCGGGAGCGGCGCAGGCGGGCCGAGGAGGCCCTCGCCCGCGTGG
ATCTCGCTGACCGCATGCACCATCGCCCCAACGAGCTCTCGGGCGGCCAGCGTCAGCGGGTGGCCATTGCGCGGGCCCTC
GTGGTGGAGCCGGCCATCATCCTCGCCGATGAGCCCACGGGGAACCTCGACTCGCGCACCGGGCTCTCCATCATGGCCCT
CTTCCAGCAGCTCCACAGGGAGGGGGCCACCATCCTCATGGTCACCCACGAGATGGATATCGCGCTCCACGCCGAGCGCA
TCGTGTACCTCAGGGACGGCCTCATCCGGGGCGACGAGCGCGTCCAGCGGCGCAAGGTCGCTGAGGAGGAGCTCGCTCGC
GTGGCGAACCTCGACGAAGAGGAGCTCTCCTCCGCCATCGAGAAGCATGGGGGGACCCATGGACCTCCGTGA

Protein sequence :
MMDEVIRLEGVTKTYTMGEVEVQALRGIWLTVRRNEFVAIMGASGSGKSTLMNIVGCLDRPTSGTYYLEGEDVSTLTDDQ
LADVRGRKVGFVFQTFNLLPRMTALKNVELPLVYAGIPERERRRRAEEALARVDLADRMHHRPNELSGGQRQRVAIARAL
VVEPAIILADEPTGNLDSRTGLSIMALFQQLHREGATILMVTHEMDIALHAERIVYLRDGLIRGDERVQRRKVAEEELAR
VANLDEEELSSAIEKHGGTHGPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STHERM_c19340 YP_003875142.1 transporter NC_012469.1.7686878. Protein 5e-59 59
STHERM_c19340 YP_003875142.1 transporter NC_008702.1.4606598. Protein 2e-46 51
STHERM_c19340 YP_003875142.1 transporter CP001581.1.gene798.p Protein 3e-39 44
STHERM_c19340 YP_003875142.1 transporter CP001581.1.gene598.p Protein 7e-36 42