Gene Information

Name : STHERM_c19310 (STHERM_c19310)
Accession : YP_003875139.1
Strain : Spirochaeta thermophila DSM 6192
Genome accession: NC_014484
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 2119112 - 2119609 bp
Length : 498 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCACCGTGACACTGAAAGGCGAACCCATCCACACCGTAGGGGAACTCCCGGCTCCCGGGCAGAAGGCTCCGGACTT
CCTCCTCACCACCGTCAACCTCACGGACGTCACCCTCGCAGACTTTCGGGGGAAGAAGAAGATCCTCAACATCGTCCCCA
GTCTCGACACCGGGGTGTGCGCCACCTCGGCCAAGCGCTTCAACGAAAAGGTACGAGGCCGGGCCGATCTGGTGGTCCTC
ACGATAAGCTGCGACCTTCCCTTCGCCCAGGACCGCTTCTGCAAGGCCGAGGGGATCGACAACGTGATCACCCTCTCCCA
GCTCCGCAACAAGGAGTTCGGCAAGGCCTACGGTGTGGAGATCGCCGACGGGCCGCTCGCAGGCCTCCTCGCCCGCGCCG
TGGTGGTCCTCAACGAGCACGACACCGTGGTCTACACAGAACTCGTTCCAGAAATTACGCGAGAACCCAACTACGACGAG
GCCCTCAGACACGTGTAG

Protein sequence : 
MATVTLKGEPIHTVGELPAPGQKAPDFLLTTVNLTDVTLADFRGKKKILNIVPSLDTGVCATSAKRFNEKVRGRADLVVL
TISCDLPFAQDRFCKAEGIDNVITLSQLRNKEFGKAYGVEIADGPLAGLLARAVVVLNEHDTVVYTELVPEITREPNYDE
ALRHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-22 42
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-22 42
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-22 42
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STHERM_c19310 YP_003875139.1 thiol peroxidase VFG0087 Protein 5e-23 42