Gene Information

Name : lolD (STHERM_c12420)
Accession : YP_003874456.1
Strain : Spirochaeta thermophila DSM 6192
Genome accession: NC_014484
Putative virulence/resistance : Resistance
Product : lipoprotein-releasing system ATP-binding protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1349625 - 1350305 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGATCCGATCATCGTCCTTGAGGAAGTGGTGAAGGAGTATCCCTCCGGCGAGACATCCCTCCGTGTGCTGGACGG
GGTCTCGGGCGGTTTCGAGAGGGGGAAGGTCCATGTGATCATGGGTGAGAGTGGATCGGGGAAGAGCACCCTCCTCCACC
TCATAGGGGGGCTCGACACCCCCACATCGGGGCGCGTACTTCTTGAAGGTCAGGACATGGGCGCCCTCGACGAGGAGGGG
CTCGCGGCCTTCCGGCAGCGAGACATGGGCTTCGTCTTCCAGATGCACTACCTCCTCCGGGAGTGTACCTCCCTGGAGAA
CGTCCTCCTCCCCGCTTATATGGCCGGGCTTTCCTTTTCTGAGGCGGCTGCGAAGGCTCGGGATCTCCTCGTGAGGGTGG
GGCTCGGAGACAGGATGCACCACTACCCCTCCCAGCTTTCCGGCGGGGAACGACAGCGGGTGGCCATTGCACGGGCCCTG
GTGAACGGCCCACGTATCGTGCTCGCCGACGAGCCCACCGGCAACCTGGACGAGCGCACGTCCCGCATGGTGGAGGATGT
GTTCTTCTCCCTCGTCCGGGAGGAGGGGGCCACGCTCATCCTCGTGACCCACGATGCCGCCCTCGCCTCTCGGGCCGACA
CCGTCTACCGCCTTGAGGGGGGGAGGCTCCATCGGTCATGA

Protein sequence : 
MSDPIIVLEEVVKEYPSGETSLRVLDGVSGGFERGKVHVIMGESGSGKSTLLHLIGGLDTPTSGRVLLEGQDMGALDEEG
LAAFRQRDMGFVFQMHYLLRECTSLENVLLPAYMAGLSFSEAAAKARDLLVRVGLGDRMHHYPSQLSGGERQRVAIARAL
VNGPRIVLADEPTGNLDERTSRMVEDVFFSLVREEGATLILVTHDAALASRADTVYRLEGGRLHRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_003874456.1 lipoprotein-releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 3e-38 48
lolD YP_003874456.1 lipoprotein-releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 6e-27 43
lolD YP_003874456.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene798.p Protein 2e-34 42
lolD YP_003874456.1 lipoprotein-releasing system ATP-binding protein LolD CP001581.1.gene598.p Protein 2e-32 41