|
Name : clpB1 (STHERM_c12380) Accession : YP_003874452.1 Strain : Spirochaeta thermophila DSM 6192 Genome accession: NC_014484 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1344176 - 1346686 bp Length : 2511 bp Strand : - Note : - DNA sequence : ATGTTTAAGGATTTGACGCAGCGCGCCCAGAAGATACTCACGGTGCTCGCCCAGGATGAGGCGAAGCGGTTTCATGCGGA AGAACTGGAGCCGGAGCATATCATCCTCGCCATCATCCGCGAAGGGGCGGGCGTTGCCTATAGAGCGATAAAACGTCTCA AGATCGCGCCGGAGGAGATCCAGGTCTTCGTAGAGAAGAATCTCTCCAAACAGAGGGGGAGTTTCATCCTCGGGGATGTG CCCCTTTCCTCCAGGAGCAGGAGGGTCCTCGAGTATGCAGCCGAGGAGGCCCGCCATTTGGACGACGAATACATTGGGAC CGAGCATCTCATGCTGGGATGTGCCCGCGACGGCGAGGGGGTGTTCACCCGGTTCCTGGCCCAGAAGGGCATCGACCTGG AAGTCTTGAGGGAGGCCATCCTCGAGGTGAAGGGGAGTGAATCGGTGTACAACAGCTCGTGGGGGGGGAAGGAGGAACAG GAGAAACGGAGGGGGGCCTTCCAGTCGGCTGCCTACAGAAAGAATACCCCATTGCTCGACGAGTTCTCCAGGGATCTCAC CGAGCTCGCCCAGACGGGTAAGCTCGATCCGGTCATCGGGAGGGAGCGTGAGCTCCGTCGTATCGTCCAGATCCTGGCCC GACGTACCAAGAACAACCCCGTGCTCATCGGTGACCCGGGGGTGGGGAAGACGGCGATCGTGGAGGCTCTCGCCCAGCGG ATCGTGCGCGGCGAGGTGCCCGAGATACTCGAGGGCAAGCGCATACTCGTCCTCGATCTTGCGGCCCTGGTGGCGGGGAC CAAGTACCGGGGCGAGTTCGAGGAACGGCTCAAGCGGGTGATGCGGGAGATCGTCTCGGTGAAGAACGTGGTCCTCTTCA TCGACGAGCTCCACACCATCATTGGCGCGGGCGGTGCCGAGGGTGCCATCGACGCCTCCAACATGCTCAAGCCTGCGCTC TCACGGGGGGAGATCCAGTGCATCGGCGCCACCACCCTGGACGAGTACCGGAAGTACATCGAAAAGGATGCGGCACTGGA GCGTAGGTTCCAGCCCGTGTACGTTCGCGAGCCGACCATCGAGGAGACGATCCAGATCCTCGAAGGGATAAAGACGAGGT ACGAGGATTTCCACAACGTCACCTATACGCGCAAGGCCGTGGAGGCGGCGGTGGTCCTCTCTGCCCGCTACATCACCGAA CGCCACCTGCCCGACAAGGCCATCGATCTGCTCGACGAGGCGGGATCGCGGACCCACGTGCAGGTGCTCAACCGGCCTCA GGAGATAGAGGAGCTTGAGAAAAAGATAGAGCAGCTCAATTCCGAGAAGATCATGCTCGTGAACACGCAGAACTACGAGC GGGCGGCTGCGGTGAGGGACCAGGTGAACCGGCTCAAGATGGAGCTCGAGAGGCTGAAGACCGCCTGGAAGCTCGAGATC AAGCGGACGCAGAACATCGTCGATCAGGAGGACATCCAGGAGGTGGTCTCCGACATCACCGGCATCCCGCTCGTGAGGAT CGCGCAGAGTGAATCGGAGCGTCTCCTCCATATCGAGGAGGAACTCCACCGGAAGGTGATAAGCCAGGACGAGGCCATAA AAGTGGTGGCATCTGCCATCCGCAGGGCGCGGACGGGGCTGAGCTCTCCAAACCGTCCCATGGGATCGTTCGTCTTCCTC GGGCCGACCGGTGTGGGTAAGACCCTTCTCGCGAAGACCTTGGCCGAATATCTCTTCGGCGACACCTCCGCGCTCATCCG GCTCGACATGTCGGACTTCATGGAGAAACACAACGTCTCGAGGCTCGTGGGGGCCCCTCCAGGGTATGTGGGCTACGAGG AGGGCGGCCTCCTCACGGAGAAGGTGCGTCATCGGCCCTATTCAGTGATACTCTTCGACGAGATAGAGAAGGCTCATCCG GATGTCTTCAACATCCTCCTTCAGATCCTCGAAGAGGGGGAACTGCAGGACAACCTGGGACACAGGGTCTCCTTCCGGAA CGCCGTACTCATCATGACCTCGAACGCGGGTGCCAGGGAGATCACCCGCGAGTCCACGGTGGGCTTCCAGACCAAGGAAG GGATCCTCGATTTCAGAGAGATCCAGGCCTCTGCGATGAACGAGTTGAGGCGCATCTTCCGTCCCGAGTTCCTCAACCGT ATCGATGAGATCGTGGTGTTCAAGAGCCTCAGCAGGGCGGATCTCGAACGGATATTGGGGCTCCTCCTGGAAGAGGTGTT CCAGCGGGTGAGGGAGCAGGGGATGGAGATAGAGATCACGAAGCGCGCTCGGGAGTATCTCCTGGAAAAAGGGTATGATC CTCGCTATGGAGCGCGACCCCTCAGGAGGACCATACAACGCGAGCTCGAAGACCCGCTCTCCATGGAGATCCTCAGGCAG CGTTTCGTGCCGGGATCGTACATCCTGGTGACGGTGAGGAGCGGGAAGCTCGTGTTCCAGCAGAAACAGACCAAGAAACC CCCTGAAAAGGTGACGGTGGAGACCCGGTAG Protein sequence : MFKDLTQRAQKILTVLAQDEAKRFHAEELEPEHIILAIIREGAGVAYRAIKRLKIAPEEIQVFVEKNLSKQRGSFILGDV PLSSRSRRVLEYAAEEARHLDDEYIGTEHLMLGCARDGEGVFTRFLAQKGIDLEVLREAILEVKGSESVYNSSWGGKEEQ EKRRGAFQSAAYRKNTPLLDEFSRDLTELAQTGKLDPVIGRERELRRIVQILARRTKNNPVLIGDPGVGKTAIVEALAQR IVRGEVPEILEGKRILVLDLAALVAGTKYRGEFEERLKRVMREIVSVKNVVLFIDELHTIIGAGGAEGAIDASNMLKPAL SRGEIQCIGATTLDEYRKYIEKDAALERRFQPVYVREPTIEETIQILEGIKTRYEDFHNVTYTRKAVEAAVVLSARYITE RHLPDKAIDLLDEAGSRTHVQVLNRPQEIEELEKKIEQLNSEKIMLVNTQNYERAAAVRDQVNRLKMELERLKTAWKLEI KRTQNIVDQEDIQEVVSDITGIPLVRIAQSESERLLHIEEELHRKVISQDEAIKVVASAIRRARTGLSSPNRPMGSFVFL GPTGVGKTLLAKTLAEYLFGDTSALIRLDMSDFMEKHNVSRLVGAPPGYVGYEEGGLLTEKVRHRPYSVILFDEIEKAHP DVFNILLQILEEGELQDNLGHRVSFRNAVLIMTSNAGAREITRESTVGFQTKEGILDFREIQASAMNELRRIFRPEFLNR IDEIVVFKSLSRADLERILGLLLEEVFQRVREQGMEIEITKRAREYLLEKGYDPRYGARPLRRTIQRELEDPLSMEILRQ RFVPGSYILVTVRSGKLVFQQKQTKKPPEKVTVETR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-166 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_003874452.1 | chaperone ClpB | VFG0079 | Protein | 0.0 | 52 |
| clpB1 | YP_003874452.1 | chaperone ClpB | VFG0080 | Protein | 2e-148 | 51 |
