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Name : lysS (PPE_00074) Accession : YP_003868514.1 Strain : Paenibacillus polymyxa E681 Genome accession: NC_014483 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 76915 - 78435 bp Length : 1521 bp Strand : + Note : TIGRFAMsMatches:TIGR00499; COGMatches:COG1190; PfamMatches:PF01336, PF00152; PrositeMatches:PS50862; go_fucntion: nucleic acid binding (GO:0003676), go_component: cytoplasm (GO:0005737) DNA sequence : ATGTCGGATGAAACTACTAACCAGGAATCACAAGAAAATCGCGAGGAATTAAGTGAATTATTGCAAATTCGTCGTGCCAA ATTGGACGAGCTTCGCTCACTGGGCATTGATCCTTTTGGACGCAAATACATACGCACGGCTGAAGCGGGCGTACTACTGA GCAAGTATGACAGTTTGACTAAGGAAGAACTGGAAGAAAAGAATATTGAAGTTAGCATAGCAGGCCGTATTATGGCTAAA CGTGTGATGGGAAAAGCCAGCTTTGCTCATATACAGGATCTCAGCGGACGTATTCAAATTTATGTTCGTCAAGATACGGT ACCTGAATCCAAATATAAGGCATTTGGTATTTTGGATCTGGGCGATATTGTTGGTGTTAAGGGTGTGCTCTTTAAGACCA AAACAGGCGAAACGACAATCAAAGTACTGGATATTGAGGTCTTGTCCAAATCCTTGTATCCATTACCGGAGAAATATCAT GGCCTGAAGGATGTTGAATTGCGTTACCGTCAACGGTATGTCGATTTGGTTATGAACCCTGAAGTACAAAAAACGTTCAT TACACGGTCTCGTATTATTCAATCCATGCGTCGTTATCTGGATTCGCTCGGCTATTTGGAAGTTGAGACCCCAACATTGC ATTCTATTGCTGGCGGGGCAGCGGCGAAGCCTTTTATTACGCACCATAATGCATTGGACATGCAGCTTTATATGCGTATT GCTATTGAACTCCATTTGAAACGACTAATTGTCGGCGGAATGGAGAAAGTATATGAGATTGGGCGTGTATACCGTAATGA AGGTATTTCGACCCGCCATAATCCTGAGTTTACGATGATTGAGCTGTATGAAGCGTATGCTGATTATAAAGATATCATGC AATTGACGGAAAACATGGTTGCACATATTGCGCAGGAAGTACTGGGCACACAGCACATTCAATATCAAGGCCAGGAAGTG GATCTAACGCCGCAATGGCGCAGAGTCTCCATGGTTGATGCTGTTAAAGAAGTAACAGGTGTAGACTTTAGCGTGCAGAT GAGTAATGAAGAAGCTCATCGTCTTGCGAAAGAGCATAAAGTTCCGGTTGAACCGCATATGACATTTGGCCATATCCTGA ATGCATTCTTTGAGCAGTTCGTAGAGGAGACGCTCATTCAGCCGACCTTTATTACGGGACATCCGGTTGAAATCTCGCCG TTGGCCAAGAAAAACGAACAAGATCCGCGGTTTACGGATCGCTTCGAGCTGTTCGTGGTCGCTCGTGAGCATGCGAATGC GTTCACTGAGCTGAATGATCCAATCGACCAGCGCCAACGTTTTGAAGCACAATTGCTGGAACGTGAGCACGGTAACGACG AGGCGCATGAAATGGATGATGACTTTATCCGCGCCTTGGAATACGGGATGCCCCCAACAGGTGGACTGGGCATCGGCATC GATCGTTTGGTTATGTTGCTGACAGATGCGCCTTCCATTCGCGATGTGCTGCTTTTCCCGCATATGCGTAACCAACAGTA G Protein sequence : MSDETTNQESQENREELSELLQIRRAKLDELRSLGIDPFGRKYIRTAEAGVLLSKYDSLTKEELEEKNIEVSIAGRIMAK RVMGKASFAHIQDLSGRIQIYVRQDTVPESKYKAFGILDLGDIVGVKGVLFKTKTGETTIKVLDIEVLSKSLYPLPEKYH GLKDVELRYRQRYVDLVMNPEVQKTFITRSRIIQSMRRYLDSLGYLEVETPTLHSIAGGAAAKPFITHHNALDMQLYMRI AIELHLKRLIVGGMEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMQLTENMVAHIAQEVLGTQHIQYQGQEV DLTPQWRRVSMVDAVKEVTGVDFSVQMSNEEAHRLAKEHKVPVEPHMTFGHILNAFFEQFVEETLIQPTFITGHPVEISP LAKKNEQDPRFTDRFELFVVAREHANAFTELNDPIDQRQRFEAQLLEREHGNDEAHEMDDDFIRALEYGMPPTGGLGIGI DRLVMLLTDAPSIRDVLLFPHMRNQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-122 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003868514.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-122 | 50 |
