Gene Information

Name : thiC (PPE_00711)
Accession : YP_003869103.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein thiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 776350 - 778158 bp
Length : 1809 bp
Strand : +
Note : TIGRFAMsMatches:TIGR00190; COGMatches:COG0422; PfamMatches:PF01964; go_process: thiamin biosynthesis (GO:0009228)

DNA sequence :
ATGAAGCCGACGGAAGTAGAAGGAACAAAAGGAACAAAAGAAGTTGAGGTAGAGAAGACAAACGGGGAGCAAGCAAGTGG
GGTAACGCCCTTTCCAGGGAGCCGTAAGGTATATATTCAAGGCTCGCGGCCGGACATTGCCGTGCCAGAGCGCGAAATTG
CTCTTCATCCTACACATACGCCGCAGGGCACGGAGCATCATGAGCCATTGCGTGTGTACGATACAAGCGGTCCCATGACC
GACGAAGCCTATCAGGTCGATATCCGTCAGGGTCTGCCTCCACTACGGCGAGCTTGGGCACTGGAACGGGGCGATGTGGA
GGCTTACGAGGGACGCGCCGTCCAGCCGGAGGATAATGGACTGAAACCTGGTTCCAAACGGGAGACAGTGGAATTTCCCG
GCGTGACCAACCGTCCGCTTCGTGCTTCGCAAGGTCGTACAGTGACACAAATGCATTATGCGCGGCAAGGGATCATTACG
CCCGAAATGGAATTTGCGGCGATCCGCGAAGGGGTGGAGCCTGAGTTTGTACGGCAGGAGTTGGCGGCTGGACGAGCCAT
TTTGCCTTCGAATATCAATCACCCGGAAAGTGAGCCCATGGTCATTGGGCGTCATTTTCACGTGAAGATCAATGCGAACA
TTGGCAATTCTGCGGTTACCTCCTCCATCGAGGAGGAAGTGGAGAAAATGACCTGGGCTGTGCGTTGGGGTTCGGATACA
GTTATGGACCTGTCCACAGGCCGTAATATCCATACAACACGTGAATGGATCATTCGGAATTCTCCTGTACCGATTGGGAC
TGTGCCGCTGTATCAGGCACTTGAAAAGGTGAACGGCGAAGCAGAAGCGCTGACGTGGGAGCTGTATCGCGATACGCTGA
TTGAGCAGGCGGAGCAGGGAGTGGACTATTTTACAATTCATGCGGGTGTATTGCTGCGGTATATACCGATGACGGCGAAT
AGAATGACGGGAATTGTATCCCGTGGTGGGTCGATCATGGCAGCCTGGTGCCTTGCGCACCATCAGGAGAATTTTTTGTA
TACACATTTTGAAGAAATCTGCGAAATTATGAAAGCCTATGATGTGGCCTTTTCTCTCGGGGATGGTCTACGTCCAGGTA
GTATCTATGATGCGAATGATGAAGCACAGTTTGCAGAGCTGGAAACGTTGGGCGAGCTAACGCAAATCGCATGGAAGCAT
GATGTTCAGGTCATGATTGAAGGGCCGGGACATGTCCCTATGCATAAAATCAAAGAGAATGTGGATTTACAAATGGAGAT
TTGTAAGGAAGCTCCTTTCTATACCTTGGGACCGCTCACGACGGATATTGCCCCCGGATATGATCATATTACCTCAGCCA
TTGGGGCGGCGATGATCGGTTGGTTCGGGACGTCCATGCTGTGCTATGTTACGCCTAAGGAGCATTTGGGTCTGCCGAAT
AAGGATGATGTCCGCGAGGGTGTCATTACCTACAAAATTGCGGCACATGCTGCCGATCTGGCGAAAGGTCATCCACGGGC
GCAGCAGCGGGATGATGCTTTGTCCAAGGCACGCTTTGAGTTCCGCTGGCGGGATCAGTTCAATCTGTCGCTTGATCCCG
AGCGGGCCTTGTCCTACCATGATGAAACGCTACCGGCAGAGGGAGCCAAGGAAGCACATTTTTGCTCGATGTGCGGCCCC
AAATTTTGTAGTATGCGCATCACACAGGACATTCGCGCCTATGCAGCGGATAAGGGGCTGAACACCGAAGAAGCAGTAGC
CGCCGGGATGCGTGAGAAGGCAGAGCAGTATCGGGATGGCGGTCAGTAA

Protein sequence :
MKPTEVEGTKGTKEVEVEKTNGEQASGVTPFPGSRKVYIQGSRPDIAVPEREIALHPTHTPQGTEHHEPLRVYDTSGPMT
DEAYQVDIRQGLPPLRRAWALERGDVEAYEGRAVQPEDNGLKPGSKRETVEFPGVTNRPLRASQGRTVTQMHYARQGIIT
PEMEFAAIREGVEPEFVRQELAAGRAILPSNINHPESEPMVIGRHFHVKINANIGNSAVTSSIEEEVEKMTWAVRWGSDT
VMDLSTGRNIHTTREWIIRNSPVPIGTVPLYQALEKVNGEAEALTWELYRDTLIEQAEQGVDYFTIHAGVLLRYIPMTAN
RMTGIVSRGGSIMAAWCLAHHQENFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQFAELETLGELTQIAWKH
DVQVMIEGPGHVPMHKIKENVDLQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTSMLCYVTPKEHLGLPN
KDDVREGVITYKIAAHAADLAKGHPRAQQRDDALSKARFEFRWRDQFNLSLDPERALSYHDETLPAEGAKEAHFCSMCGP
KFCSMRITQDIRAYAADKGLNTEEAVAAGMREKAEQYRDGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 69
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 69
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 68