Gene Information

Name : PPE_04505 (PPE_04505)
Accession : YP_003872803.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein fhuC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 4930622 - 4931515 bp
Length : 894 bp
Strand : -
Note : COGMatches:COG1120; PfamMatches:PF00005; PrositeMatches:PS00211, PS50893; go_fucntion: ATPase activity (GO:0016887)

DNA sequence : 
ATGTTTCGTCTGAAAACGGCAAATCTGGATATTGCTTATGAAGATCGATTGATTGTAGAAGATCTGAACGTAGAAATACC
GCAAGGGAAAATCACAGCCTTGGTGGGCGCAAATGGTTCTGGCAAGTCCACCATTCTGAAGACGATGGCTCGCATCATGA
ATCCTAAGGGCGGCAGTGTTCTGCTTGACGGTAAATCCATTCATAAGCAATCCACCCGGGAAGTAGCTAAACAGCTGGCT
ATTTTGCCACAAAATCCGACTGCACCGGAAGGATTAACCGTGACGGAACTGGTATCTTACGGACGTTTTCCCTATCAAAA
AGGCTTTGGTTCCATGAAAGCAGAAGATCGCAAAATGGTAGAGTGGGCCATTCAAGTAACGGGAATGAGCGAATTCCACG
ATCGTCCGATTGATCAGCTTTCTGGCGGTCAGCGTCAGCGTGCCTGGATTGCTATGGCGCTCGCGCAGGATACGGATATT
TTGTTTCTGGATGAGCCGACGACATTTTTAGATATGGCGCATCAACTGGAAGTGTTGCATTTGCTAGAGTATCTGAATAC
TTCGGAGGAGCGCACCATTGTTATGGTCGTGCATGATTTGAACCATGCGGCCCGGTATGCTCAGCATATGATTGCGATCA
AAAAAGGGAAAGCTGAGGCGGTAGGAACTCCAACTGAGGTTATGTCCCCTGATGTGCTGCGTGAGGTGTTCGGGATCGAA
GCGGATATTGTAACAGATCCTCGTACGGGTGTACCGCTCTGTCTTCCGTATGCTTTGGCTGGACAGCCTGCGGTGAGCCA
AGCAATAAAAGAAATGAATGTGGAAGATAAGCAACCCGTGGGTTCTGTTGCCGAGCGTCGTGATACTAGAGCACAAGTAG
CGGCAAGAGGTTAA

Protein sequence : 
MFRLKTANLDIAYEDRLIVEDLNVEIPQGKITALVGANGSGKSTILKTMARIMNPKGGSVLLDGKSIHKQSTREVAKQLA
ILPQNPTAPEGLTVTELVSYGRFPYQKGFGSMKAEDRKMVEWAIQVTGMSEFHDRPIDQLSGGQRQRAWIAMALAQDTDI
LFLDEPTTFLDMAHQLEVLHLLEYLNTSEERTIVMVVHDLNHAARYAQHMIAIKKGKAEAVGTPTEVMSPDVLREVFGIE
ADIVTDPRTGVPLCLPYALAGQPAVSQAIKEMNVEDKQPVGSVAERRDTRAQVAARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-57 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-52 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-52 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-52 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-52 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-55 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-59 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-59 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-55 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-56 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_04505 YP_003872803.1 ferrichrome transport ATP-binding protein fhuC BAC0164 Protein 1e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_04505 YP_003872803.1 ferrichrome transport ATP-binding protein fhuC VFG0925 Protein 3e-56 47
PPE_04505 YP_003872803.1 ferrichrome transport ATP-binding protein fhuC VFG1042 Protein 1e-55 46