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Name : PPE_04310 (PPE_04310) Accession : YP_003872612.1 Strain : Paenibacillus polymyxa E681 Genome accession: NC_014483 Putative virulence/resistance : Virulence Product : Negative regulator of genetic competence clpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4686752 - 4689196 bp Length : 2445 bp Strand : - Note : COGMatches:COG0542; PfamMatches:PF02861, PF00004, PF02151, PF07724; PrositeMatches:PS50151, PS00870, PS00871; go_process: protein metabolism (GO:0019538), go_fucntion: ATP binding (GO:0005524), go_process: nucleotide-excision repair (GO:0006289) DNA sequence : ATGATGTTTGGAAGATTTACGGAACGTGCACAGAAAGTGCTTGCTTTGGCTCAGGAAGAAGCTGTTCGATTGGGACACAA CAACATTGGCACAGAACACATTTTGCTAGGTCTCATTCGTGAAGGTGAAGGAATAGCAGCAAAAGCCTTAATCGGTTTAG GGCTGGGACTCGAAAAAATCCAGGATGAAGTGGAAACGCTGATTGGACGCGGTCAAGAGCAACCGACGAACATTGCCTAT ACTCCACGCGCCAAAAAGGTCATCGAACTGTCTATGGATGAAGCCCGCAAACTGGGCCATACCTATGTAGGTACAGAACA TATTTTGCTTGGTCTTATTCGTGAAGGCGAAGGCGTAGCAGCACGCGTACTGAACAACCTGGGCATCAGTCTGAACAAAG CGCGTCAGCAAGTGCTTCAATTGCTCGGCAGCAGCGAGGCTGTTTCCAGCCATCACGGTGCTCCAGCTAATGTCAGCACG CCAACTCTGGACAGTCTGGCACGCGATCTGACGGCATCTGCGAAGGAAAACAACCTGGACCCTGTTATTGGGCGTAGCAA GGAAATTGAACGCGTAATCCAGGTGCTCAGCCGCCGTACAAAGAACAATCCGGTTCTGATTGGTGAGCCTGGGGTAGGTA AAACGGCGATTGCCGAAGGTTTGGCCCAAAAAATCATAGCGAATGAGATTCCCGAAACGTTGCGTGACAAGCGCGTAATG ACACTGGATATGGGTTCTGTGGTAGCAGGCACCAAGTATCGTGGTGAATTCGAGGATCGTTTGAAAAAAATTATGGACGA GATTCGTCAAGCGGGTAATATCGTGTTGTTCATTGATGAGCTGCATACGCTGATTGGTGCTGGTGGAGCGGAAGGCGCAA TTGATGCGTCCAACATCCTGAAACCTGCTCTGGCACGTGGCGAGCTGCAATGCATCGGTGCGACCACGCTGGATGAATAC CGCAAATATATTGAGAAAGATGCTGCTTTGGAACGTCGTTTTCAACCCATTACAGTGGATCAACCTTCTCCAGAAGAGGC GATTCAAATCTTGTATGGTCTGCGTGACCGTTACGAAGCGCATCACCGTGTAAAGATCACAGATGAGGCTATTGAAGCGG CTGTAAAATTGTCAGATCGTTATATCACCGACCGCTTCCTGCCAGATAAGGCAATTGACCTTATTGATGAAGCGGGCTCC AAAGTAAGGCTGAATTCTTACACTGTACCGCCAAACCTGAAACAGCTGGAAAACCGTCTGGAAGATATCCGTAAGGAAAA GGATTCAGCGGTACAAAGCCAGGAGTTTGAAAAAGCGGCAGCGCTGCGTGATACAGAGCAAAAAATCCGTGAAGAGCTAG ACGTGACGAAAAACCAATGGAAAGAACAACAGGGTCGTACAGATTCTGAAGTTACACCAGAGGATATCGCTCAGGTCGTT GCAATCTGGACAGGTGTTCCAGTCAGCAAGCTGAAAGAGGAAGAAACACACCGCTTGTTGAATATGGAAGAGTTGCTGCA TGAGCGGGTAATTGGACAGGATGAAGCAGTTAAGGCAGTAAGCCGGGCGATTCGCCGGGCACGTGCCGGATTGAAAGATC CGAAACGTCCAATGGGTTCCTTTATTTTCCTCGGTCCAACTGGGGTGGGTAAAACAGAGTTGGCACGCGCCTTGGCTGAA TCCATGTTTGGAGATGAAAATGCGGTTATCCGTATTGATATGTCTGAATATATGGAGAAACACTCCACGTCCCGTCTGGT AGGAGCGCCTCCAGGGTATGTTGGATATGAGGAAGGCGGTCAACTGACCGAGAAGGTACGTCGTAAGCCTTACTCTGTTG TATTGCTGGATGAAATTGAAAAAGCACACCCAGAAGTATTCAATATTCTTCTGCAAGTACTGGAAGATGGTCGTCTGACA GATTCCAAAGGTCGTGTCGTTGATTTCCGTAATACACTCATCATCCTAACATCAAATGTTGGTGCACAGGCGATTAAACG TAACTCCACGCTTGGTTTTACAGCTGTAGTGGACGCTGGGGCGGATTACGATAATATGAAGGGCAAAGTGATGGATGAAC TGAAGAAAAGCTTCCGTCCTGAGTTCTTGAACCGGATTGATGAAATTATCGTTTTCCATTCTCTCGAAGAAAAACATATT GCCGAAATTGTGTCACTCATGTCTGAGGAGCTACGTAAGCGCCTGAACGAGTATGAGGTGGACTTCGAGTTGACAGACAA CGCTAAAAAATTCCTTGCCAAGGAAGGCTTTGATCCAGCGTATGGTGCGCGTCCATTGCGTCGTGCAATCCAGAAGCATA TTGAAGATCGCCTGTCCGAGGAACTGTTGACTGGCAACATTACTAAGGGTGACTCTCTCTTCATTGATGAGGAGAATGGT GCATTGACTGTAACGAAAAAGGATAATGTATCTGCCAAGTCCTAA Protein sequence : MMFGRFTERAQKVLALAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIGLGLGLEKIQDEVETLIGRGQEQPTNIAY TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLNNLGISLNKARQQVLQLLGSSEAVSSHHGAPANVST PTLDSLARDLTASAKENNLDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIIANEIPETLRDKRVM TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY RKYIEKDAALERRFQPITVDQPSPEEAIQILYGLRDRYEAHHRVKITDEAIEAAVKLSDRYITDRFLPDKAIDLIDEAGS KVRLNSYTVPPNLKQLENRLEDIRKEKDSAVQSQEFEKAAALRDTEQKIREELDVTKNQWKEQQGRTDSEVTPEDIAQVV AIWTGVPVSKLKEEETHRLLNMEELLHERVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAE SMFGDENAVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLT DSKGRVVDFRNTLIILTSNVGAQAIKRNSTLGFTAVVDAGADYDNMKGKVMDELKKSFRPEFLNRIDEIIVFHSLEEKHI AEIVSLMSEELRKRLNEYEVDFELTDNAKKFLAKEGFDPAYGARPLRRAIQKHIEDRLSEELLTGNITKGDSLFIDEENG ALTVTKKDNVSAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PPE_04310 | YP_003872612.1 | Negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 77 |
| PPE_04310 | YP_003872612.1 | Negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 6e-155 | 52 |
| PPE_04310 | YP_003872612.1 | Negative regulator of genetic competence clpC/mecB | VFG2084 | Protein | 3e-97 | 41 |
