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Name : ribD (PPE_04136) Accession : YP_003872454.1 Strain : Paenibacillus polymyxa E681 Genome accession: NC_014483 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein ribD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 1.1.1.193 Position : 4489938 - 4491038 bp Length : 1101 bp Strand : - Note : TIGRFAMsMatches:TIGR00326; COGMatches:COG0117; PfamMatches:PF00383, PF01872; PrositeMatches:PS00903; go_fucntion: hydrolase activity (GO:0016787), go_process: riboflavin biosynthesis (GO:0009231) DNA sequence : ATGACCACTCACGAAAAATATATGCGCCTGGCACTGGAAAATGCCAGAAGTGCTAAAGGGCAAACCGAACCGAATCCGCT TGTCGGATCAGTCATTGTCAACAATGGCCGTATCGTTGGGATCGGCGCTCATCTGAAGCCCGGCGAGCCACATGCCGAGA TTCATGCGCTGCGTATGGCGGGTGAACACGCTCAGGGAGCGACAATTTACGTAACGCTGGAGCCGTGCTCCCATCATGGT CGGACAGGCCCGTGCGCGGAAGCGATTGTGAAGGCTGGCATTCGTCGAGTGGTGATTGCAGCGCTGGACCCGAACCCACT GGTTTCCGGCAGAGGGGTACAGATTTTGAAAGATGCGGGCATTGAGGTCATTGTCGGAGTATGTGAGCAGGAATCCATCC GCATGAATGAAGTGTTCAATCAATATATCGTGAGCAAGCGTCCTTTTATTACGATCAAATCGGCAGTAACACTAGACGGT AAAATTGCAACCCGGACCTCGGAAAGCAAATGGATTACATCTGAGGCTGCACGGGAGGATGTGCATCGTCTTCGTAACGA GCATGTGGGAATTCTGGTCGGTGTACAGACGGTGATTCACGATAATCCTCAGCTTACGACTCGTCTACCGGAAGGACGGA ATCCGATTCGCATCATTTTGGATAGCAAGCTTCGTATTCCATTGGATGCCCGTGTCATTACAGATGGGGAGGCGCCTACC TGGATATTCACAGGACGCGTTTATGATGAAGGCAAGCGTAGCCAGTTGGAACAGCTGGGTGTAAAGGTATATACGACACA GGATGAAAACAGTGAGCGAGTCAACCTTCCGCAAATGCTGGATATTTTGGGAGCGGCGGAGGTCTCATCAGTATTCGTGG AAGGCGGGGCCGAGGTGAACGCTTCGTTCGTACAGCAAGGGCTGGCAGACAGGCTGGTGCTGTACATTGCGCCAAAGCTG GTTGGAGGACGCGCAGCCCCGGGATTTCTCGGGGGAGAGGGCGTGTCTGCGATGAGCGATGCGGTGGCATTGCATGATTT GAGCGTGACACCGGTTGGTGTAGACTGGAAAATAGAAGGGTATTTTGGGCGGGGAAAATGA Protein sequence : MTTHEKYMRLALENARSAKGQTEPNPLVGSVIVNNGRIVGIGAHLKPGEPHAEIHALRMAGEHAQGATIYVTLEPCSHHG RTGPCAEAIVKAGIRRVVIAALDPNPLVSGRGVQILKDAGIEVIVGVCEQESIRMNEVFNQYIVSKRPFITIKSAVTLDG KIATRTSESKWITSEAAREDVHRLRNEHVGILVGVQTVIHDNPQLTTRLPEGRNPIRIILDSKLRIPLDARVITDGEAPT WIFTGRVYDEGKRSQLEQLGVKVYTTQDENSERVNLPQMLDILGAAEVSSVFVEGGAEVNASFVQQGLADRLVLYIAPKL VGGRAAPGFLGGEGVSAMSDAVALHDLSVTPVGVDWKIEGYFGRGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 5e-55 | 41 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 5e-55 | 41 |
