Gene Information

Name : PPE_04107 (PPE_04107)
Accession : YP_003872425.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4455283 - 4455960 bp
Length : 678 bp
Strand : +
Note : COGMatches:COG1136; PfamMatches:PF00005; PrositeMatches:PS00211, PS50893; go_fucntion: ATPase activity (GO:0016887)

DNA sequence : 
ATGGCTCTATTAAAAACTCAGGCACTAAAAAAGCATTATGGTAATGGGGATACTGCTGTTCATGCCTTAGACGGCGTGAA
TCTGGAGGTGGAAAGCGGTGAATTTGTCGCCATTGTCGGTACATCCGGGAGCGGCAAATCTACCCTTCTTCATATGCTGG
GTGGACTTGATCGTCCAACAAGTGGAGACGTTATGATTGATGGTAAGGATATTTCTTCACTGAAAGACGAAGAATTGACT
ATTTTTCGCAGACGAAAGATTGGGTTCGTTTTTCAAAATTACAACCTGGTACCTGTCTTGAATGTCTACGAAAATATTGT
GCTTCCTATTGAACTGGACGGAAAAGAACCGGACAAAGCCCACGTAGATAAAATTGTACATACCTTAGGCCTTCACCACA
AAATGAATAATCTGCCAAACAATCTTTCCGGTGGACAACAGCAACGTGTAGCTATTGCCAGAGCCCTAGCAGCCAAGCCC
GCCATTATCTTGGCAGATGAACCCACTGGAAACCTGGACAGTAAAACCAGTCTGGATGTGATGGGATTGATCAAAGTATC
CAGCCAGCAGTTCCGCCAAACGATAGTGATGATTACCCACAACGAGGAAATCGCGCAAATGGCAGACCGGATCATCCGGA
TTGAGGACGGTAAAATAGTTGGCGGTGAAGGCAAATGA

Protein sequence : 
MALLKTQALKKHYGNGDTAVHALDGVNLEVESGEFVAIVGTSGSGKSTLLHMLGGLDRPTSGDVMIDGKDISSLKDEELT
IFRRRKIGFVFQNYNLVPVLNVYENIVLPIELDGKEPDKAHVDKIVHTLGLHHKMNNLPNNLSGGQQQRVAIARALAAKP
AIILADEPTGNLDSKTSLDVMGLIKVSSQQFRQTIVMITHNEEIAQMADRIIRIEDGKIVGGEGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-36 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-36 47
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_04107 YP_003872425.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-67 70
PPE_04107 YP_003872425.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-55 59
PPE_04107 YP_003872425.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-33 45
PPE_04107 YP_003872425.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-33 45
PPE_04107 YP_003872425.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-32 45