Gene Information

Name : PPE_04068 (PPE_04068)
Accession : YP_003872386.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Resistance
Product : transcriptional repressor smtB
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 4410588 - 4410956 bp
Length : 369 bp
Strand : -
Note : COGMatches:COG0640; PfamMatches:PF01022; PrositeMatches:PS50987; go_component: intracellular (GO:0005622)

DNA sequence : 
ATGAATTCTGAAACGGAAGCTTTGGATTGCGAGCCGGCTTGTCACGGTTCAGATCAGGAAATCGAGCGCATAAAATCTTC
CCTTGTTGAGGATTCCATCGCATACAAAATGTCGGAGCTGTTTAAAGCACTGGGTGACCCGACACGAATCAAGCTGATTT
ATGCCCTGGCACAAAAAGAATTGTGTGTTCATGATCTGACCCAGGTGTTGAACATGGGACAATCTGCGGTGTCTCACCAG
CTTCGTTATTTGCGCAACCTGCGTATTGTCAAACGACGCAAGGAAGGCAAAACGGTGTTTTATTCACTGGATGATAATCA
TGTGGAGCAGATCTTTTTGCAAACCCATCAGCACATATCACATCAATAA

Protein sequence : 
MNSETEALDCEPACHGSDQEIERIKSSLVEDSIAYKMSELFKALGDPTRIKLIYALAQKELCVHDLTQVLNMGQSAVSHQ
LRYLRNLRIVKRRKEGKTVFYSLDDNHVEQIFLQTHQHISHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 1e-15 41
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_04068 YP_003872386.1 transcriptional repressor smtB BAC0456 Protein 2e-18 43
PPE_04068 YP_003872386.1 transcriptional repressor smtB BAC0366 Protein 3e-15 41