Gene Information

Name : rdgB (PPE_03743)
Accession : YP_003872080.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Unknown
Product : HAM1 protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 4093350 - 4093982 bp
Length : 633 bp
Strand : -
Note : TIGRFAMsMatches:TIGR00042; COGMatches:COG0127; PfamMatches:PF01725; go_fucntion: hydrolase activity (GO:0016787)

DNA sequence :
ATGCGGCTGGATGGCCCGGTCGTCATTGTCGCTACGAAGAATAAAGGAAAGGTGCGGGAATTTGCGCATGCTTTTGCGCC
GTTTGGCAAGGAAGTCAGAAGCATGTACGATTATCCCGACATTCCTGATGTCGTTGAAGATGGCAAAACCTTTGCCGAAA
ATGCACTGAAAAAAGCTAAAGCGGTTGGAGATGTGCTCGGATTGCCCGTGCTGGCCGATGATTCCGGCCTCTGCGTGGAC
TTGCTGGACGGTGCGCCTGGGGTATACTCTGCCCGTTATGCTGGAGAAGGTGCCAGCGATCACGAAAACAATATTAAGCT
GCTCGACGTTCTGGAATCGAAGCAGCTGGGTGATGATACGGGACAGCCTTTACTAAGCCCGGCTCAATTCGTCTGTACCT
TGATTCTATATAATCCGCAGACTGGCGAGACGTTGGAATCGACTGGCTCCGTGGAGGGCTGGATTACTACTGAAACCGCC
GGCAGCGGCGGGTTTGGGTATGATCCGCTGTTTTATTTGCCAGAGTTTGAAAAGACAATGGCCGAGCTGACGTTGGAACA
AAAGCAGGCTATCAGTCACCGAGGGATAGCTCTGCGTGATTTGGCAACAAAGCTGGGTAATCCACAGGCATAG

Protein sequence :
MRLDGPVVIVATKNKGKVREFAHAFAPFGKEVRSMYDYPDIPDVVEDGKTFAENALKKAKAVGDVLGLPVLADDSGLCVD
LLDGAPGVYSARYAGEGASDHENNIKLLDVLESKQLGDDTGQPLLSPAQFVCTLILYNPQTGETLESTGSVEGWITTETA
GSGGFGYDPLFYLPEFEKTMAELTLEQKQAISHRGIALRDLATKLGNPQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-18 42