Gene Information

Name : hemC (PPE_03679)
Accession : YP_003872019.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4017235 - 4018161 bp
Length : 927 bp
Strand : -
Note : TIGRFAMsMatches:TIGR00212; COGMatches:COG0181; PfamMatches:PF01379, PF03900; PrositeMatches:PS00533; go_process: porphyrin biosynthesis (GO:0006779)

DNA sequence : 
ATGCGAACAATTGTGGTAGGCAGCAGACAGAGTGCGCTGGCGTTAACTCAGACCGGGCATGTCATTGAAGATTTGAATGC
GCTGTGCGCGGAGCAAGGAATGGATTTGCAATTTGTCGTGAAGAAAATCCTGACCAAGGGTGATCGAATTTTGGATGTAA
CCTTGTCCAAAGTGGGTGGCAAAGGGCTTTTTGTCAAAGAAATTGAACAGGCTATGCTGGCTGGTGAGATTGATATGGCA
GTACATAGTATGAAGGATATGCCTTCCGAATTGCCGGAAGGGCTTGTCAACGGCGCTGTGCCGCACCGTGAGGATCCACG
TGATTGCCTGATCACATTGGGCGCCAAGAGCCTGGAGGATTTGCCTCAAGGGGCAAAGGTGGGCACGAGCAGTCTGCGCA
GAGCCAGTCAAATCAAGTCCATGCGACCTGATCTACAATTGGAGCCTGTGCGTGGTAATATTGATTCCCGTCTGAAAAAG
CTGGAGACGGAAGGTTTTGACGCTATCATTTTGGCGGCAGCAGGCTTGCATCGGATGGGCTGGAAAGAGCGAATTACGTC
TTATATACCGGAAGCAGACTGTTTGCCAGCGGTTGGGCAGGGAGCGCTGGGTATTGAATGTCGTGCGAGCGATGAAGAGC
TATTGGCCTTGCTGCGCCTTTACAACGACCGGGATACCTCGGCTACCGTTGCGGCAGAACGAACCTTTCTGGGTGTGTTA
AATGGGGGATGCCAAGTGCCGATCGGGGCTCATGCGGTCTGGGCTGGTCAAGAAATCAGCCTTACGGGCATGGTAGGCTC
GCCAGATGGCGAGGTTATTTTGAAGGAAACGCTCCAGGGAAATGATCCGCAAAAGCTGGGAGAAGCGGTGGCGGCCAGTT
TGATAGCCAAAGGAGCGGAACAGATTCTGGCGCAGGTGAGGGGATGA

Protein sequence : 
MRTIVVGSRQSALALTQTGHVIEDLNALCAEQGMDLQFVVKKILTKGDRILDVTLSKVGGKGLFVKEIEQAMLAGEIDMA
VHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLEDLPQGAKVGTSSLRRASQIKSMRPDLQLEPVRGNIDSRLKK
LETEGFDAIILAAAGLHRMGWKERITSYIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVL
NGGCQVPIGAHAVWAGQEISLTGMVGSPDGEVILKETLQGNDPQKLGEAVAASLIAKGAEQILAQVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-63 50
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-63 50