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Name : lpdA2 (PPE_02529) Accession : YP_003870897.1 Strain : Paenibacillus polymyxa E681 Genome accession: NC_014483 Putative virulence/resistance : Unknown Product : dihydrolipoyl dehydrogenase (E3 component of pyruvate complex) Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 2789067 - 2790488 bp Length : 1422 bp Strand : - Note : TIGRFAMsMatches:TIGR01350; COGMatches:COG1249; PfamMatches:PF07992, PF00070, PF02852; PrositeMatches:PS00076; go_process: electron transport (GO:0006118), go_component: cytoplasm (GO:0005737) DNA sequence : ATGGTAGTAGGAGACGCTTCTCTGGATATTGACACATTGGTTATCGGTGCGGGTCCTGGCGGCTATGTAGCTGCCATCCG TGCCGCACAATTGGGACAAAGCGTATTGATCGTTGACAAATCTGAGCTGGGCGGTGTCTGTCTGAACCGTGGATGTATTC CATCCAAAGCTTTGATCTCTGCAGCTCATCAATACGAAGCAGCTAAACATGGCGAGTCTTTCGGTATTACTGCTGAGAAC GTAAAAGTAGACTTTGCTAAAACACAAGAATTCAAAAACGGTGTTGTTAAGAAAATGACAGGCGGCGTAAGTGGCTTGCT CAAAGGCAACAAAGTTGAAGTTTTCAATGGTGAGTGCATGTTCATCAACGAAAACGAAGCGCGTGTATTCAACGAACATG AATCACCACGTTACCGTTTTAAAAATGCAATTATCGCAACAGGTTCCCGTCCAATCGAACTGAAACCATTCCCATTTGGC GGACGCATTCTATCTTCTACAGAAGCATTGAACCTGCCTGAAATTCCGAAAAGCCTGATCGTAATCGGTGGTGGATACAT TGGTGCAGAGCTTGGACAAATGTACTCCAAATTCGGTTCCAAAGTAACGATTATTGAAGGTATGGATACAGTACTTCCTG GTTTCGACAAAGATATGACTTCAATCGTTGCGAAAAGCATGAAGAAAACTGGCATCGAAATCTTTACTGGCGCTAAAGCG GAAAGTGCAGAGCAAACAGATAAAGACGTAACAGTGAAATTCTCCGTTAACGGCGAAAGCAAAGAAGTAACTGCTGATTA TCTGCTTGTAACTGTTGGACGTCGTCCAAACACTGACGGTGAGCTGGGTCTGGATCTTATCGGTGTAGAACTGGATGACC GTGGAATGGTGAAAGTTGATCACCAAGGACGTACTAGCATTCCTCACATCTTTGCAATCGGCGATATCGTAGCTGGTCTT GCTCTGGCACACAAAGCTTCTTACGAAGGTAAAGTGGCTGCTGAAGCAATCGCAGGCGAGCCGTCTGTAGTAGATTACAA ATGTATGCCAGCTGTCGTTTTCACAGATCCAGAATGCTCTAGCGTAGGCTACACAGAAACACAAGCTAAAGAAAAAGGCT ACAATGTCAAAGTTGGCAAGTTCTCTTATGGAGCAAACGGTCGTGCGGTTTCCCTGAACGCTGCTGAAGGTTTTGTGAAA ATCGTAGCTGACGCTGACACTGGTCTGGTACTGGGTACGCAAATCGTAGGTCTGGAAGCTTCCAACCTTATTGCTGAGCT GGGTCTGGCGATTGAAATGGGTGCTACACTCGAAGATATCTCCTTGACTATTCATGCTCACCCTACATTGGGCGAAATCG TTATGGAAGCAGCGGAAGTCGTGCTGGGTCACCCGATTCATGCATTGGCACCACGTCGCTAA Protein sequence : MVVGDASLDIDTLVIGAGPGGYVAAIRAAQLGQSVLIVDKSELGGVCLNRGCIPSKALISAAHQYEAAKHGESFGITAEN VKVDFAKTQEFKNGVVKKMTGGVSGLLKGNKVEVFNGECMFINENEARVFNEHESPRYRFKNAIIATGSRPIELKPFPFG GRILSSTEALNLPEIPKSLIVIGGGYIGAELGQMYSKFGSKVTIIEGMDTVLPGFDKDMTSIVAKSMKKTGIEIFTGAKA ESAEQTDKDVTVKFSVNGESKEVTADYLLVTVGRRPNTDGELGLDLIGVELDDRGMVKVDHQGRTSIPHIFAIGDIVAGL ALAHKASYEGKVAAEAIAGEPSVVDYKCMPAVVFTDPECSSVGYTETQAKEKGYNVKVGKFSYGANGRAVSLNAAEGFVK IVADADTGLVLGTQIVGLEASNLIAELGLAIEMGATLEDISLTIHAHPTLGEIVMEAAEVVLGHPIHALAPRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-112 | 53 |
