Gene Information

Name : PPE_02222 (PPE_02222)
Accession : YP_003870593.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Virulence
Product : sensory transduction protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2424858 - 2425526 bp
Length : 669 bp
Strand : +
Note : COGMatches:COG0745; PfamMatches:PF00072, PF00486; PrositeMatches:PS50110, PS00217; go_process: regulation of transcription, DNA-dependent (GO:0006355)

DNA sequence : 
ATGAAAAAGATACTCCTGATTGAGGATGAGAAAAACTTGGCTCGTTTCATTGAGCTTGAACTAAAGCATGAATCTTACGA
GGTGACTGTCGAGTACGAGGGGCGGAAAGGGCTGGAGTCTGCGTTAAGCGAGGAATGGGACATCATTCTGCTGGATTTAA
TGCTGCCAGGCATCAATGGAATTGAAGTGTGCCGGCGGATTCGCAAAACAAAGCAAACCCCGATCATTATGCTAACTGCA
AGGGACGGTGTGATGGATAAAGTGATGGGATTGGACAGTGGAGCTGATGATTATATCCCAAAGCCTTTTGCCATTGAGGA
ACTTCTGGCCCGGATGCGTTCTTTGCTCCGGCGCAGTGGATTCGTTGAAGATTCCAAGCAAATTACTTACAACGGGCTGG
TGCTGGATAGCGAGGCGCGTATTTTGACAAAGGACCAACAGATTATTGAATTGACGAAGCGTGAATTTGATCTGCTGTCC
ATATTGATGCATAACATCGGACGCGTCATGACTCGGGAGAGACTGCTGGAGCTTATATGGGGCTATGATTCGGAGGTCGA
AACGAATGTCGTCGACGTGTATATTCGTTACTTGCGTAGCAAAATCGACGAGCCTGGAGAAGCAAGCTTTATACAGACAT
TACGCGGATTAGGCTATGTGATTCGATAA

Protein sequence : 
MKKILLIEDEKNLARFIELELKHESYEVTVEYEGRKGLESALSEEWDIILLDLMLPGINGIEVCRRIRKTKQTPIIMLTA
RDGVMDKVMGLDSGADDYIPKPFAIEELLARMRSLLRRSGFVEDSKQITYNGLVLDSEARILTKDQQIIELTKREFDLLS
ILMHNIGRVMTRERLLELIWGYDSEVETNVVDVYIRYLRSKIDEPGEASFIQTLRGLGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-33 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_02222 YP_003870593.1 sensory transduction protein HE999704.1.gene1528. Protein 2e-66 67
PPE_02222 YP_003870593.1 sensory transduction protein NC_002952.2859858.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_007622.3794948.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_003923.1003417.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_013450.8614146.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_002951.3238224.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_007793.3914065.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_002758.1121390.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein NC_010079.5776364.p0 Protein 2e-50 57
PPE_02222 YP_003870593.1 sensory transduction protein AE015929.1.gene1106. Protein 3e-46 56
PPE_02222 YP_003870593.1 sensory transduction protein NC_012469.1.7685629. Protein 5e-38 45
PPE_02222 YP_003870593.1 sensory transduction protein BAC0125 Protein 1e-31 42
PPE_02222 YP_003870593.1 sensory transduction protein NC_012469.1.7686381. Protein 4e-34 41
PPE_02222 YP_003870593.1 sensory transduction protein AE016830.1.gene1681. Protein 5e-34 41
PPE_02222 YP_003870593.1 sensory transduction protein BAC0083 Protein 2e-30 41
PPE_02222 YP_003870593.1 sensory transduction protein AE000516.2.gene3505. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_02222 YP_003870593.1 sensory transduction protein VFG0596 Protein 2e-33 44
PPE_02222 YP_003870593.1 sensory transduction protein VFG1390 Protein 5e-40 42
PPE_02222 YP_003870593.1 sensory transduction protein VFG1389 Protein 6e-33 42