|
Name : lpdA1 (PPE_01610) Accession : YP_003869985.1 Strain : Paenibacillus polymyxa E681 Genome accession: NC_014483 Putative virulence/resistance : Unknown Product : dihydrolipoyl dehydrogenase (E3 component of pyruvate complex) Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1717824 - 1719209 bp Length : 1386 bp Strand : + Note : TIGRFAMsMatches:TIGR01350; COGMatches:COG1249; PfamMatches:PF07992, PF00070, PF02852; PrositeMatches:PS00199, PS01039; go_process: electron transport (GO:0006118), go_component: cytoplasm (GO:0005737) DNA sequence : ATGAGCAAGCTTGAATCTGTAGAAACACTGGTCATTGGATCAGGGCCGGGAGGTTATGTGGCGGCATTGCGTTCTTCTCA GCTTGGAATGAAAACCGCGATTGTTGAACGCAGTCAGCTAGGTGGGGTGTGCACGCATGTGGGCTGCATTCCATCCAAGG CTTTGATTGCCGAAGCACATCGCTATGAGATACTCAGGCAGGTAAATCCGGCTGATGCAGCGGTGTCCTTCGTGAATGCT CAAGCCTTCAAACAGGGGATTGTGAATAAGCAGGCAGGCGGAGTTGGCTTTTTAATGAAAACGGCAGGTGTGAGCATTCT GGAAGGGGAGGCAAGTTTGGTTGATGGGCATACAGCCATCATCAATCAAAATGGAGCGGAACAAACGATATCCTTTAAGT ATGCCATATTGGCAACCGGCTCCCGTCCAATCGAACTGAAAGCATTTCCGTTTGGCGGACGTATTTTGTCCTCTACAGAG GCGCTTTCGCTTCCAGAGGTTCCGTCCAGCCTGATCGTGATAGGTGGTGGATATATTGGCATTGAGCTTGGACAAATGTA TGCCAAATTTGGAACAAAGGTAACGATCCTGGAGGGAGGGGAGCGGGTGCTGCCGGGATTTGAGATGGACCTTGTGGCCC CTGTTGTTAAGCAATTGAAAACAGATGGTGTAAGCATCGTAACCGGGGCGGTAGCCGAAAAAGTCGTGCAGAATACGGAT ACTATTACGCTGCATTATTCAAAAGATCAAGAGCAGCATCATGTCACCGCTGAGTTTGTATTAGTTACTGTAGGCAGAAA ACCGAATACGGATGGCAGATTAGGATTGGAGCACATTGGCTTGCCACTGACGAGCAGGGGGTTGATCGAGACAGACGAGC AGTGTAGAACGGTTATTCCGCATATTTTTGCCATTGGAGATATTACGGAGGGTCCAGCCCTTGCCCATAAGGCTTCCTAT GAAGCGAAGATTGCGGCAGAAGCGATTGCAGGTCAAGCTGCTAAAGTGGATTATAAAGCCATGCCGTTGGTTGTCTTTTC TGAACCAGAGCTGGCTAGTGTTGGCCTAAGTGAAACAGAAGCAAAGGAAAAAGCCTTACCGATTGTCATTGGCAGAGCTT CCTTTGCAGTTAACGGCAGAGCATTGGCATTAAGAGCAGCAGAGGGGTACATCAAAATCGTAGCAAAGCAGGGGTCGGGG ATCGTACTGGGGGCGCAAATCGTCGGCGTCGAAGCTTCAACACTCATTTCCGAACTTGCTCTGGCTATCGAGATGGGAGC AACCGTAGAAGACTTAGCTCTAACCATTCATCCCCATCCTACATTGGGAGAAGTAATCATGGAGGCTGCGGAGAATGCGG TCAGAAAAATGGACCGTCCAAAGTAG Protein sequence : MSKLESVETLVIGSGPGGYVAALRSSQLGMKTAIVERSQLGGVCTHVGCIPSKALIAEAHRYEILRQVNPADAAVSFVNA QAFKQGIVNKQAGGVGFLMKTAGVSILEGEASLVDGHTAIINQNGAEQTISFKYAILATGSRPIELKAFPFGGRILSSTE ALSLPEVPSSLIVIGGGYIGIELGQMYAKFGTKVTILEGGERVLPGFEMDLVAPVVKQLKTDGVSIVTGAVAEKVVQNTD TITLHYSKDQEQHHVTAEFVLVTVGRKPNTDGRLGLEHIGLPLTSRGLIETDEQCRTVIPHIFAIGDITEGPALAHKASY EAKIAAEAIAGQAAKVDYKAMPLVVFSEPELASVGLSETEAKEKALPIVIGRASFAVNGRALALRAAEGYIKIVAKQGSG IVLGAQIVGVEASTLISELALAIEMGATVEDLALTIHPHPTLGEVIMEAAENAVRKMDRPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-99 | 49 |
