Gene Information

Name : pyk2 (PPE_01576)
Accession : YP_003869953.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1684121 - 1685551 bp
Length : 1431 bp
Strand : +
Note : TIGRFAMsMatches:TIGR01064; COGMatches:COG0469; PfamMatches:PF00224, PF02887; PrositeMatches:PS00110; go_process: glycolysis (GO:0006096)

DNA sequence : 
ATGCGCAAAACTAAGATTGTATGTACCATCGGTCCTTCCAGTGAGTCATTGGAAAATGTGAAGAAACTGATTTTGGCTGG
TATGAACGTAGCCCGCCTGAATTTCTCTCACGGTGATTTCGAGGAGCATGGCAACCGGATTAAAAACATCCGTCAAGCTT
GTAAGGAGCTTAACAAAAACGTTGCTATTTTGCTCGATACGAAGGGGCCGGAAATCCGGACAGGAAAGCTCGAAGTTGAA
CCTATTGAGCTTGTTCAGGACGAGTTCATTACGCTGACAACGGAAGAAATTCTCGGTACGCAAGATCGTATCTCCATTAC
GTACAAGGATCTTCCCTCGGACGTGGAGCCCGGCTCCACCATTCTGATCGACGATGGTCTGATCGGACTCACCGTTATTG
AAGTATCAGGCACTGAAATCAAATGTCGCATTGTTAATGGCGGAACGATCAAGAGCAAGAAGGGCGTTAACGTTCCAGGC
GTTGCTATTTCATTGCCTGGTATTACCGAAAAAGATGCTAATGATATCATTTTCGGTATTGAGCAGGACATTGATTTCAT
CGCGGCTTCTTTTGTTCGTAAAGCAAGTGATGTGCTGGAAATCCGTGAATTGCTGGCGAAACACAACGCAAGTCATATCC
AAATCATTTCCAAAATAGAAAATCAGCAAGGTGTTGACAACCTGGATGAAATTTTGGAAGCTTCGGATGGCCTGATGGTT
GCTCGTGGTGACCTCGGTGTGGAAATTCCTGCTGAAGAAGTGCCTCTGGCGCAAAAATTGATGATTAACAAATGTAATGT
AGCTGGCAAGCCTGTTATTACGGCAACACAAATGCTGGATTCCATGCAACGTAACCCGCGTCCGACTCGTGCGGAAGCAA
GTGACGTGGCGAATGCTATTTTTGACGGAACAGACGCAATTATGCTGTCCGGCGAAACAGCTGCGGGTAAATATCCGGTA
GAATCCGTATTGACGATGTCACGTATTGCAGAAAAAGCTGAGTCTTCTCTGAACTACCGTGATTTGTTCAAAAAACAAAG
AACGGCTCAAGAAATTAGTATCACAGAAGCAATCAGCCAATCCGTTTCTATTTCTGCACTTGACCTGCATGCCAAAGCGA
TCCTGACGTCCACACAAAGCGGAACAACGGCGCGTATGATCTCTAAATACCGTCCAGAAGCTCCGATTGTCGCTGTGACA
ACACAGGAAAGAACAGTTCGCCGTTTGGCTCTGATCTGGGGCGTACATGCAGTACAAGGCAGACCAATCGTTGACACAAC
AGACAGTCTGTTTGACAACGCGCTGGAAGGCGGTCGCAAATCTGGCCTCGTTAAAGAGGGCGATTTGGTTGTGATTACTG
CGGGCGTACCTCTTGGTGATTCCGGTTCTACGAACTTGGTCAAAATTAGCTGCGTTCCAGCACAAGCGTAA

Protein sequence : 
MRKTKIVCTIGPSSESLENVKKLILAGMNVARLNFSHGDFEEHGNRIKNIRQACKELNKNVAILLDTKGPEIRTGKLEVE
PIELVQDEFITLTTEEILGTQDRISITYKDLPSDVEPGSTILIDDGLIGLTVIEVSGTEIKCRIVNGGTIKSKKGVNVPG
VAISLPGITEKDANDIIFGIEQDIDFIAASFVRKASDVLEIRELLAKHNASHIQIISKIENQQGVDNLDEILEASDGLMV
ARGDLGVEIPAEEVPLAQKLMINKCNVAGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGKYPV
ESVLTMSRIAEKAESSLNYRDLFKKQRTAQEISITEAISQSVSISALDLHAKAILTSTQSGTTARMISKYRPEAPIVAVT
TQERTVRRLALIWGVHAVQGRPIVDTTDSLFDNALEGGRKSGLVKEGDLVVITAGVPLGDSGSTNLVKISCVPAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 8e-110 54
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-110 54
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-110 54
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-109 54
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 6e-58 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk2 YP_003869953.1 pyruvate kinase VFG0479 Protein 3e-110 54