Gene Information

Name : glnA1 (PPE_01422)
Accession : YP_003869800.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Virulence
Product : glutamine synthetase (glutamate--ammonia ligase)
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1527124 - 1528548 bp
Length : 1425 bp
Strand : +
Note : TIGRFAMsMatches:TIGR00653; COGMatches:COG0174; PfamMatches:PF03951, PF00120; PrositeMatches:PS00180, PS00181; go_process: nitrogen compound metabolism (GO:0006807)

DNA sequence :
ATGTCCGTTGAAACCGTATTGAAAACAATTCAGGAAAATAATATTGAGTGGGTAGATTTTCGTTTTGTAGATTTGTCTGG
TCGTGCTCACCATATTTCATTGCCAGCTTCCGAAGTAGATGAAGAGACATTTGTTAACGGTGTTGCTTTCGACGGTTCTT
CCATCCCCGGCTATCGTGGCATTGAGGAATCCGACATGGTTATGCTGCCCGATCCAGAAGCGGTTTTTATCGACCCTTTC
ACTCAGCATCCTACACTGAATATCCTGTGTGACATTGCTACGCCAGACGGCGAAAAATACGACCGCGATCCTCGCGGCAT
CGCAAAAAAAGCTGAGGCATTTCTGCAATCGGCAGGAGTGGGCACAGCAGCATTTTTTGCACCTGAGTCCGAGTTTTTCA
TCTTTGATGATGTACGCTACGAAAGCGGCATGAACAGCTCCTCCTTCTTCGTAGATTCCGAGGAAGCAGCTTGGAACACG
AACCGTAAGGAAGAAGGCGGCAACCTGGGCTTTAAAGTGGGAGTGAAGGGCGGATATGTACCTGTAGCGCCAGTAGACAC
CCAACAAGATATCCGTAGTGAAATGTGCCGTTTGCTTGAAGAAGCAGGTCTGAGAATTGAGCGCCATCACCATGAGGTAG
CTACGGCAGGCCAAGCGGAAATCAACTTCCGTTTTGATACACTCAAGAAAACAGCAGACAACCTGCTCGTTTATAAATAC
ATTGTACACAACACAGCTCGTCAATATGGTAAAGTGGCAACATTCATGCCGAAACCGATTTTTGGGGATAACGGAAGCGG
TATGCACGTTCACCAATCTATTTTCGATGGGGACACTCCTTTGTTCTACGAAAAAGGTGGTTATGCTAATCTGAGCGAAA
TGGCTCTTCATTACATTGGCGGTATTCTGTACCACGCACCTGCGTTGATCGCTTTGACCAACCCAAGCACCAACTCGTTC
AAACGTCTCGTTCCTGGCTACGAAGCACCAGTTAACCTGGTATTCTCCAAAGGTAACCGTTCTGCGGCTGTACGTATTCC
AGTAGCAGCTGTTACTCCTAAAGGCTGTCGGATCGAGTTCCGTACACCGGACTCCACAGCTAACCCTTACCTTGCCTTCT
CAGCAATGCTGATGGCGGGTCTGGATGGCATCAAGCGCAAACTGAACCCAATCGAATTGGGATATGGTCCACTTGACAGC
AACATCTACGAGCTGTCTGACGCTGAAAAAGGTAAAATCCGTAGCGTACCTGGTTCATTGGATGAGGCTCTGGACGCTCT
GGAAGCTGACTACGAATTCTTGACTGAAGGCGGCGTATTTACGAAGGACTTTATTGATAACTATGTAGAGCTCAAACGTT
CTGAAGCTAAATCGGTGAACATCCGTGTTCATCCACACGAATACAGCCTGTATTTTGACTGCTAA

Protein sequence :
MSVETVLKTIQENNIEWVDFRFVDLSGRAHHISLPASEVDEETFVNGVAFDGSSIPGYRGIEESDMVMLPDPEAVFIDPF
TQHPTLNILCDIATPDGEKYDRDPRGIAKKAEAFLQSAGVGTAAFFAPESEFFIFDDVRYESGMNSSSFFVDSEEAAWNT
NRKEEGGNLGFKVGVKGGYVPVAPVDTQQDIRSEMCRLLEEAGLRIERHHHEVATAGQAEINFRFDTLKKTADNLLVYKY
IVHNTARQYGKVATFMPKPIFGDNGSGMHVHQSIFDGDTPLFYEKGGYANLSEMALHYIGGILYHAPALIALTNPSTNSF
KRLVPGYEAPVNLVFSKGNRSAAVRIPVAAVTPKGCRIEFRTPDSTANPYLAFSAMLMAGLDGIKRKLNPIELGYGPLDS
NIYELSDAEKGKIRSVPGSLDEALDALEADYEFLTEGGVFTKDFIDNYVELKRSEAKSVNIRVHPHEYSLYFDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-89 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_003869800.1 glutamine synthetase (glutamate--ammonia ligase) VFG1399 Protein 1e-116 53