Gene Information

Name : PPE_01407 (PPE_01407)
Accession : YP_003869785.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1510904 - 1512112 bp
Length : 1209 bp
Strand : +
Note : COGMatches:COG0626; PfamMatches:PF01053; PrositeMatches:PS00868; go_process: amino acid metabolism (GO:0006520)

DNA sequence : 
ATGGAAGTTAACAGGAGGATTCATATGAGTGAGAAACAGTGGAAAATCGAAAGCAGATTGGCACAAATCGGTTCAGTAGA
GGAGCCAGTAACCGGGGCTGTTAATTACCCGATTTACCAATCTACGGCGTTCCGCCATCCCCGTCTGGGTCAAAGCACAG
GATTTGATTACATTCGGACGATCAATCCCACGCGAAAGGTACTGGAAGAGGCTTCTGCTGCACTTGAATCGGGTGATGCA
GGCTTTGCATGCAGCTCAGGTATGGCGGCACTGCAAACGGTATTTGCATTGTTTGGACAGGGAGATCACCTCATTGTATC
GCTGGATCTGTATGGTGGGACCTATCGTTTGTTGGAGCGTATTTTATCTAAATTTGGTGTAACAGCCAGTTATGTGGATA
CGAACGATCTTGAAGCACTCGAACAGTCATGTCGACCGAATACCAAAGCTGTATTCATAGAAACACCTACAAATCCGTTA
ATGATGATTACTGATATTCGAGCGGTGGCTGAATGGGCATCACAACATCAGTTGCTTACCATTGTAGATAATACGCTGCT
AACGCCATATTTCCAGCGACCATTGGAACTGGGCGCGGATATTGTGGTACATAGCGCAACCAAATATTTGGGCGGACACA
ACGATGTGCTGGCAGGGTTGATCGTAACCAAAGGCAAAGAGCTATCGGCTGAAATTTCCTTCCTGCACAATTCCATAGGG
GCCGTGCTTTCCCCGAGCGACTGCTATCAGTTGATGAAGGGGATGAAGACGTTAGCGCTGCGTATGGACCGACATGAGCA
TAATGCAACAGTGCTGTCTAACTATTTACTGACGCATCCGGCGGTGGCGGAAGTATTTTATCCAGCTCTCGAAGGCCATC
CAGGTCGTGAGATTCAAAATAAACAATCCAGCGGAAATACGGGTATCTTCTCCTTTAAAGTAAAGGATGCTCGTTATGTG
GAACCGTTGCTTCGTCACATTAAGCTCATTGCGTTTGCGGAAAGTCTCGGCGGTGTGGAATCGTTAATGACTTATCCCGC
TGTGCAGACCCATGCGGACATACCAGCAGAAATTCGGGATGCAGTCGGGGTAGATGATAGGCTGTTGCGTTTCTCCGTAG
GCATTGAGCATACAGACGACCTAATTGAAGATTTGCGTTCAGCGTTGGAAGCGGCACGTCAAGAAGTAGAAGGAGGAGAG
CTGCAATGA

Protein sequence : 
MEVNRRIHMSEKQWKIESRLAQIGSVEEPVTGAVNYPIYQSTAFRHPRLGQSTGFDYIRTINPTRKVLEEASAALESGDA
GFACSSGMAALQTVFALFGQGDHLIVSLDLYGGTYRLLERILSKFGVTASYVDTNDLEALEQSCRPNTKAVFIETPTNPL
MMITDIRAVAEWASQHQLLTIVDNTLLTPYFQRPLELGADIVVHSATKYLGGHNDVLAGLIVTKGKELSAEISFLHNSIG
AVLSPSDCYQLMKGMKTLALRMDRHEHNATVLSNYLLTHPAVAEVFYPALEGHPGREIQNKQSSGNTGIFSFKVKDARYV
EPLLRHIKLIAFAESLGGVESLMTYPAVQTHADIPAEIRDAVGVDDRLLRFSVGIEHTDDLIEDLRSALEAARQEVEGGE
LQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-89 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-90 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PPE_01407 YP_003869785.1 cystathionine beta-lyase BAC0207 Protein 4e-56 41