Gene Information

Name : PPE_01222 (PPE_01222)
Accession : YP_003869608.1
Strain : Paenibacillus polymyxa E681
Genome accession: NC_014483
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1323948 - 1326170 bp
Length : 2223 bp
Strand : +
Note : COGMatches:COG2183; PfamMatches:PF00575; PrositeMatches:PS50126; go_fucntion: RNA binding (GO:0003723)

DNA sequence :
TTGTCTAACGAGGAAACGAAGACGGAAATCCGGCAGGAGCCGAACGAAGCGGAACGCCAAGAGCGGATTGTCAAACAAGT
GGCGAGAGAGCTGTCGCTGGCACTCAAGCAAATCCGGACAACGATCAGTTTGTTGGATGAAGGGAATACAATTCCTTTTA
TCGCGCGTTATCGTAAGGAAATGACAGGAGAGCTGGATGAAAATCAGCTACGTGAAATTGAAGATCGTGTGGTGTATTTG
CGTAATCTGGAGGATCGTAAGGTAGAGGTCATCCGCATTATTGATGAGCAGGGCAAGCTGACGGAAGACCTGCAGGCTGC
TATCACCTCTGCGGTTAAACTTCAGGAAGTGGAGGATCTGTATCGTCCGTATCGGCAAAAGCGCAAAACCCGCGCCAGTG
TAGCAAAGGAACGGGGACTGGAGCCGCTGTCCATCTGGATCTGGAGCCAGCCGAAGCAGGGCGATGCTCTGAAAGAAGCC
GAGTCTTATGTAAATGCGGAACTGGGAGTGGACAGCGCTGAGGCTGCCATCCAAGGAGCCTTAGATATTTTAGCTGAAAA
TATAGCGGATGATGCGGCTATTCGCCAATGGGTACGCCGATATACGCTGGACCATGGTATGTTGACCTCCGAAGCGAAGG
ACGCGGAGCAAGAATCTGTGTATGAGAACTACTATAGCTATCGTGAGCTGGCTAAGAAAATGCCACCTCACCGTATTCTG
GCGATTAATCGCGGAGAGCGGGAAGGCATTCTTAAGGTTGGTTTGGAGGTAGTGCCAGATTCCATTTACAATTACGTGGC
CGGCCAAGTGATTAAAGGATCGTCTGTCGTGCAAGATCTGCTCCGCAGTGTCATTGAGGATGCGTATAAAAGACTTATCG
CGCCATCTATCGAGCGTGAAGTACGCGCTGAAATGACGGAGAAGGGCGAGCAGCAGGCCATCTCCATCTTTGCAGGCAAC
TTGCGCAGCCTGTTGCTACAAGCTCCGATCAAGGGCCGACGTGTGCTCGGTGTCGATCCGGCCTATCGGACAGGCTGTAA
GCTGGCGGTTGTCGATGACACCGGCAAGCTGCTGGAAGTGGCAGTGACGTATCCGACACCGCCGAACAACAAGAAGCGCG
AGGCTGCTGAAAAGTTCAAGCAGCTAATTGCCCAATACGGGATCGAATTGATTGTCATTGGTAACGGAACCGCTTCGCGC
GAGACAGAGCAATTCGTAGCGGAAGTCATCGCGGACATTGGTGACAGCAGTCTAGCGTATCTGATCGTCAATGAGGCGGG
CGCGAGCGTATATTCTGCCTCCAAGCTGGCACAGGAGGAATTTCCTGATTTGGACGTGGCCGAGCGCAGTGCGGCTTCCA
TCGCACGTCGTGTGCAGGACCCGCTGGCTGAGCTGGTCAAAATTGAGCCGAAGGCTATTGGTGTAGGCCAATACCAGCAT
GATGTGTCGCAGAAACATCTGGATGAAAGCTTAAAGGACGTTGTCGAATCAGCCGTTAACCATGTCGGTGTGGATGTGAA
CACAGCTTCCTCTGCGCTGTTATCCTATGTAGCGGGGATCAATGCGACGATTGCCAAAAACATCGTTAAGTACCGTGAGG
AAAACGGTAAATTCAGCAACCGTCGTCAGTTGCAGAAGGTGCCGCGCCTTGGCGCAAAAACCTATGAGCAATCTGTAGGC
TTTATCCGTATACCGGGTGGAGAAAATCCGCTGGACCGTACACCGATTCACCCTGAATCGTATGCTGTCGTAGACCGCCT
GTTGGCGGAACTGGACATCAGCGCCCATGATCTGGGTACTAAGACTGCAATGGAGGCACTGAGCGTGTCCAACATTGACG
AATTGGCTGCAAAGCTGGAAGTCGGCGTGCCGACACTGAAGGATATTCTGGACAGTCTCCAGCGTCCGGGCCGTGACCCG
CGTGACGAGCTGCCGTTGCCTGTATTCCGCAAGGATGTGCTGAAGATCGAGGATCTCTCACCAGGTATGGAGCTTCAGGG
AACCGTCCGTAATGTCATTGATTTCGGCGCATTTGTCGATATCGGTATTAAAAGTGACGGGTTGGTTCATATTTCACAGC
TGCGCAGTGGCTTTGTAAAGCATCCGATGGATGTCGTATCTGTCGGTGATAACGTAACGGTGTGGGTGTTGAATGTTGAT
TTGAAAAAAGGCAGGGTTGGTCTGACGATGAAACCTCCTGCAGAGGCGCAATCGCAGGCATAA

Protein sequence :
MSNEETKTEIRQEPNEAERQERIVKQVARELSLALKQIRTTISLLDEGNTIPFIARYRKEMTGELDENQLREIEDRVVYL
RNLEDRKVEVIRIIDEQGKLTEDLQAAITSAVKLQEVEDLYRPYRQKRKTRASVAKERGLEPLSIWIWSQPKQGDALKEA
ESYVNAELGVDSAEAAIQGALDILAENIADDAAIRQWVRRYTLDHGMLTSEAKDAEQESVYENYYSYRELAKKMPPHRIL
AINRGEREGILKVGLEVVPDSIYNYVAGQVIKGSSVVQDLLRSVIEDAYKRLIAPSIEREVRAEMTEKGEQQAISIFAGN
LRSLLLQAPIKGRRVLGVDPAYRTGCKLAVVDDTGKLLEVAVTYPTPPNNKKREAAEKFKQLIAQYGIELIVIGNGTASR
ETEQFVAEVIADIGDSSLAYLIVNEAGASVYSASKLAQEEFPDLDVAERSAASIARRVQDPLAELVKIEPKAIGVGQYQH
DVSQKHLDESLKDVVESAVNHVGVDVNTASSALLSYVAGINATIAKNIVKYREENGKFSNRRQLQKVPRLGAKTYEQSVG
FIRIPGGENPLDRTPIHPESYAVVDRLLAELDISAHDLGTKTAMEALSVSNIDELAAKLEVGVPTLKDILDSLQRPGRDP
RDELPLPVFRKDVLKIEDLSPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQLRSGFVKHPMDVVSVGDNVTVWVLNVD
LKKGRVGLTMKPPAEAQSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 1e-147 47