Gene Information

Name : yfmF (BSUW23_03805)
Accession : YP_003865126.1
Strain : Bacillus subtilis W23
Genome accession: NC_014479
Putative virulence/resistance : Virulence
Product : iron-dicitrate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 788241 - 789038 bp
Length : 798 bp
Strand : -
Note : -

DNA sequence : 
ATGGGAAAACTGGCTGCAGACCAGCTCACTCTTTCATATGACAGCACAGTGATTATTGACGGAGTCGATTTAAAGATAGA
AGAAGGAAAAATCACTGCGCTCATCGGCGCCAATGGCTGCGGGAAATCAACAATCCTCAAATCGCTTGCCAGGCTGATGG
CTCCAAAAAGCGGTACGGTCCTATTGGAAGGAAAAGATATACACCGCCAGCCGTCAAAAGAAGTCGCAAAAAAACTGGCC
ATTCTTCCTCAATCTCCTCAGGCGCCTGAGGGATTGACAGTAGAGGAATTATGCTATTTCGGCAGACATCCTCACAAAAA
GCTGTTATCCAAGCATACCCAAGAGGATCACGACATGGTAGAGTGGGCGCTGGACGCAACGGGCATGATTGAGCTGAAAG
AACGGACACTGGATGCCCTGTCAGGCGGCCAAAGACAAAGAGCATGGATTTCCATGGCACTTGCGCAAGGCACTGATTTG
CTTTTGCTTGACGAACCGACCACGTATTTAGACATTTCACACCAGATTGAAGTTCTTGAGCTGCTGAAAAAGCTAAACCG
CGATCATGGCCGCACCGTAGTCATGGTACTCCATGACTTAAACCAAGCCGCTCAATATGCTGACTATCTGATCAGTGTGC
TGGACGGAAAAATATACAATGCCGGAACACCGGAAGATGTGTTTACCCAGCCGTTTTTCCGTGAAGTCTTCGGCTTGGAA
TGCTGTATCATGAGAAGCCCGATCGACCAGAAGCCCATGTGCCTGCCGACGGGACTGTGCCCGAAATTACGAGCGTAA

Protein sequence : 
MGKLAADQLTLSYDSTVIIDGVDLKIEEGKITALIGANGCGKSTILKSLARLMAPKSGTVLLEGKDIHRQPSKEVAKKLA
ILPQSPQAPEGLTVEELCYFGRHPHKKLLSKHTQEDHDMVEWALDATGMIELKERTLDALSGGQRQRAWISMALAQGTDL
LLLDEPTTYLDISHQIEVLELLKKLNRDHGRTVVMVLHDLNQAAQYADYLISVLDGKIYNAGTPEDVFTQPFFREVFGLE
CCIMRSPIDQKPMCLPTGLCPKLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-54 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-60 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-50 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-50 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-56 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-56 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_003865126.1 iron-dicitrate ABC transporter ATP-binding protein BAC0164 Protein 2e-54 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF YP_003865126.1 iron-dicitrate ABC transporter ATP-binding protein VFG1042 Protein 2e-54 48
yfmF YP_003865126.1 iron-dicitrate ABC transporter ATP-binding protein VFG0925 Protein 3e-59 48