Gene Information

Name : ydfA (BSUW23_02635)
Accession : YP_003864894.1
Strain : Bacillus subtilis W23
Genome accession: NC_014479
Putative virulence/resistance : Resistance
Product : metal-anion antiporter protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 544154 - 545461 bp
Length : 1308 bp
Strand : +
Note : -

DNA sequence :
TTGACTTCAGTCATTTTGGCGGTATTGATATTTTTAGTAACTTTGGTCTTGGTCATATGGCAGCCGAGAAACTTGTCTAT
AGGGTGGTCAGCCTGTGGAGGAGCTGTTTTAGCTCTAATAGCCGGAGTTGTCAATTTTCATGATGTCTTAACTGTGACAG
GGATTGTTTGGAATGCGACATTGGCATTTGTGGCAATTATTATTATCTCGTTAATCCTTGATAACATCGGTTTCTTTGAA
TGGGCAGCGCTTCATATGGCTAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTATGTATCTATATTAGGAGCTAT
CGTCGCTGCATTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCGATTGTATTAGCGATGGTCAGAGCATTACATT
TCAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGTGGGTTTATTGCAGATACGACTTCGCTTCCATTAGTCGTAAGC
AATTTGGTCAACATCGTCTCAGCAGATTATTTTCATATTACGTTTATTGAATATGCATCCAGAATGATTGTCCCGAACTT
GTTCTCGTTATTGGCGAGTATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGTTATGATCTGACGGAGG
TTAAAAAACCTGTTGAAGCAATAAAAGATCAAAACATGTTCAAGCTATCATGGTACATCTTGGGGCTGCTGTTAGTTGGA
TATTTTGCCAGTGAATTTTTCTCTATTCCTGTATCAGTTGTAGCGGGTATCATTGCCATCTTTTTCTTAATTGCTGCACA
AAAGAGCCCAGCCGTTCAGACAAAGAAAGTACTGAAAGGTGCGCCGTGGGCTATCGTTTTCTTTTCAATTGGCATGTACG
TTGTTGTGTACGGTGTCCGTAATGCTGGATTGACAGATGTCCTTTCAGATGTGATTCAAGCCGTCTCTGACCAAGGGGTG
TTCGCAGGTACAATTGGAATGGGCTTTATCGCGGCGATTCTTTCTTCCATTATGAATAACATGCCGACTGTCATGATTGA
TGCACTGGCTATTGCCGGCACAGATACACATGGGATGATGAGAGAAGCGCTCATATATGCAAATGTCATCGGTTCAGATT
TAGGACCTAAAATCACGCCGATTGGTTCCTTGGCGACACTATTATGGCTCCATGTCCTTTCACAAAAAGGTGTGAAGATT
TCCTGGGGCACGTATTTTAAAACAGGAATCATTCTGACAATCCCAACTTTATTTATTACACTTGTCGGCCTGTATCTTTG
GCTGATGATCATCCATTCATGTTTCTAA

Protein sequence :
MTSVILAVLIFLVTLVLVIWQPRNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIIIISLILDNIGFFE
WAALHMAKAAKGNGVRMFVYVSILGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPLVVS
NLVNIVSADYFHITFIEYASRMIVPNLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFKLSWYILGLLLVG
YFASEFFSIPVSVVAGIIAIFFLIAAQKSPAVQTKKVLKGAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAVSDQGV
FAGTIGMGFIAAILSSIMNNMPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSQKGVKI
SWGTYFKTGIILTIPTLFITLVGLYLWLMIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-123 71
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-120 70
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-123 69
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-103 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ydfA YP_003864894.1 metal-anion antiporter protein BAC0575 Protein 4e-123 71
ydfA YP_003864894.1 metal-anion antiporter protein BAC0574 Protein 3e-122 71
ydfA YP_003864894.1 metal-anion antiporter protein BAC0031 Protein 2e-98 60
ydfA YP_003864894.1 metal-anion antiporter protein BAC0578 Protein 1e-100 60
ydfA YP_003864894.1 metal-anion antiporter protein BAC0576 Protein 2e-101 60
ydfA YP_003864894.1 metal-anion antiporter protein BAC0577 Protein 7e-100 59