Gene Information

Name : ytrE (BSUW23_14745)
Accession : YP_003867295.1
Strain : Bacillus subtilis W23
Genome accession: NC_014479
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2900209 - 2900904 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGATGTTCAGCATATTAACCATTCTTTCACGATCGGAAAAAAGGGCCGTGAGAATGAAGTGCCTGTCTTAAAAGA
TGTCTCGTTGACTGTTGCGAAAGGTGAAATCGCTTGTATCGTCGGACGAAGCGGGTCGGGGAAGTCAACGCTTCTGAATT
TGATTTCAGGCTACATCTCACCAACAAAAGGGCGTATTGTGATTAACGGAACTGATGTCACGGGCTTTAATGAAAAGGAA
TGGGCTCAGTTCCGCCTTGAACACTTTGGGTTTATTTTTCAAAGCTTTCAGCTCATCCCGGGTTTAACGACGTATGAAAA
TGTTGAAATGCCGCTGGCGTTAAAAGGGATCAAACCGTCCGAGCGCAAGCAAAAGGTACAGGATATGCTGAAGCGCGTTG
GTCTTGAAAACCATGCCGCTCATTATCCGAATGAACTGTCAGGCGGCCAGCAGCAGCGTGTCAGCATTGCGAGAGCGTTG
ATTTTAAATCCGTCGATTATTTTAGCGGATGAGCCGACAGGAAGCCTTGATTCAGAAACGGAACAGGAAGTGCTGAATTT
GATTCAACAGCTAAACCGTGAGCGGGGCATTACATTTGTGATCATTACTCACGATGATGAAGTGGCTTCCATCGGACATT
CAAAATTTCAGCTTCATGACGGAGTGTTAAAAGGGGGAATTACCGTTGAGGTTTAA

Protein sequence : 
MIDVQHINHSFTIGKKGRENEVPVLKDVSLTVAKGEIACIVGRSGSGKSTLLNLISGYISPTKGRIVINGTDVTGFNEKE
WAQFRLEHFGFIFQSFQLIPGLTTYENVEMPLALKGIKPSERKQKVQDMLKRVGLENHAAHYPNELSGGQQQRVSIARAL
ILNPSIILADEPTGSLDSETEQEVLNLIQQLNRERGITFVIITHDDEVASIGHSKFQLHDGVLKGGITVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-34 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-34 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ytrE YP_003867295.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-42 46
ytrE YP_003867295.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-38 44
ytrE YP_003867295.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-41 43
ytrE YP_003867295.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-37 42
ytrE YP_003867295.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-24 41