Gene Information

Name : clpE (BSUW23_07040)
Accession : YP_003865765.1
Strain : Bacillus subtilis W23
Genome accession: NC_014479
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1396013 - 1398112 bp
Length : 2100 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTGTCAACATTGTCATCAAAACGAGGCGACGATTCGCCTTAACATGCAAATAAATTCCGTTCATAAACATATGGT
TCTATGTGAAACCTGCTATAACGAACTGACTCGTAAACCTTCAATGAGCATGGGTCCTCAATCTTTCGGTTTTCCGTTTG
AACATGCATTCCAGCCGAAAGAACATAGCGCAGCAAAACAAAGCGAGAAAAAAGGATTGCTTGATGAGCTGGCTCAAAAT
ATTACAAACGGTGCAAAAGCAGGTCTCATTGACCCCGTCATCGGCCGTGATGAAGAAGTGGCGCGCGTGATCGAAATTCT
GAACCGCCGCAACAAAAACAATCCAGTTCTGATTGGTGAGCCGGGTGTAGGGAAAACCGCCATAGCCGAAGGACTTGCTT
TAAAAATTGCTGAAGGTGATGTTCCAAACAAACTGAAAAACAAAGAGCTTTACTTGCTTGATGTTGCATCCCTTGTTGCA
AACACAGGGATCAGAGGCCAATTTGAAGAGAGAATGAAACAGCTGATCACTGAGCTGAAAGAACGAAAAAATGTCATTCT
GTTCATTGATGAAATTCATCTTCTCGTTGGCGCAGGCTCTGCAGAAGGATCAATGGACGCAGGCAACATTCTTAAACCTG
CCCTTGCCAGAGGCGAACTGCAAGTCATTGGTGCGACAACACTGAAAGAATACCGTCAAATCGAAAAAGATGCCGCGCTG
GAAAGACGTTTTCAGCCTGTTATGGTGCAGGAGCCTTCAATTGAACAGGCCATCCTCATTCTGCAAGGGATCAAAGACAA
ATATGAAGCATACCATGGCGTGACATTCAGTGATGAAGCAATCAAAGCATGTGTGACTTTATCATCCCGCTACATTCAGG
ACAGACACCTGCCGGATAAAGCCATTGACTTATTAGATGAAGCAGGTTCAAAAGCCAATCTGTTAATTGATGAGCTGAAT
GATGAAGATGCGGCTGAACGCTTAACTGCGATTGAAGCCGAAAAAACAAAAGCCCTGGAAGAAGAAAATTACGAACTGGC
GGCAAAACTCCGTGATGAAGAAATTGCATTAGATAAAAAGCTGAACAGCTCTTCTGCTCATTCCGATGTCACTGTGGAAG
CTGAGCACATTCAGGATATCATTGAACAAAAAACAGGCATCCCTGTCGGCAAACTGCAGGCAGATGAACAAACAAAAATG
AAAGAGCTTGAAGCAAAACTTCGTGAACGCGTGATCGGACAAGAAGTCGCTGTTCAAAAAGTGGCAAAAGCGGTAAGACG
AAGCCGCGCCGGATTAAAATCCAAAAACAGACCAGTCGGCTCCTTCCTCTTTGTCGGTCCTACCGGCGTAGGGAAAACAG
AGCTTTCTAAAACGCTGGCAGATGAATTATTCGGCACAAAAGACGCGATCATCCGTCTCGATATGAGCGAATACATGGAG
AAACACGCCGTATCTAAAATCATTGGTTCACCGCCTGGATATGTCGGCCATGAGGAAGCTGGGCAATTAACAGAAAAAGT
GCGCCGCAATCCATACAGCATCGTGTTGCTGGATGAGATAGAGAAAGCGCACCCTGACGTTCAGCATATGTTCCTGCAAA
TTATGGAGGACGGCCGTCTGACAGACAGCCAAGGCAGAACCGTAAGCTTTAAAGACACTGTGATTATCATGACAAGCAAC
GCGGGTGCTGGTGAGAAACAAACGAAAGTCGGTTTCCAATCAGATGACAGTGTAATTGAAGAACAAACATTGATTGATTC
ACTGAGCATGTTCTTTAAGCCTGAGTTCCTCAACCGTTTTGACAGCATTATTGAGTTCCGCTCACTGGAAAAAGAACATT
TGGTCAAAATCGTCAGCCTGCTGCTTGGAGAACTTGAAGAAACATTGTCAGAACGCGGCATCAGCTTGAGTGTGACAGAC
GAAGCGAAAGAAATACTCGCTGAGCTGGGCTATCACCCTTCATTCGGCGCCCGTCCGCTCAGAAGAACCATCCAAGAATG
GATTGAGGATAAAATGACCGATCTGCTGCTTGACAATAGCGAGATCACAAGTTTTCACGTCACTGCAGAAGATCATACAA
TCAAAGTGCAAGCGAAATAA

Protein sequence :
MRCQHCHQNEATIRLNMQINSVHKHMVLCETCYNELTRKPSMSMGPQSFGFPFEHAFQPKEHSAAKQSEKKGLLDELAQN
ITNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVA
NTGIRGQFEERMKQLITELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAAL
ERRFQPVMVQEPSIEQAILILQGIKDKYEAYHGVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLLIDELN
DEDAAERLTAIEAEKTKALEEENYELAAKLRDEEIALDKKLNSSSAHSDVTVEAEHIQDIIEQKTGIPVGKLQADEQTKM
KELEAKLRERVIGQEVAVQKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDAIIRLDMSEYME
KHAVSKIIGSPPGYVGHEEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVIIMTSN
AGAGEKQTKVGFQSDDSVIEEQTLIDSLSMFFKPEFLNRFDSIIEFRSLEKEHLVKIVSLLLGELEETLSERGISLSVTD
EAKEILAELGYHPSFGARPLRRTIQEWIEDKMTDLLLDNSEITSFHVTAEDHTIKVQAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-143 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_003865765.1 ATP-dependent Clp protease VFG0080 Protein 0.0 63
clpE YP_003865765.1 ATP-dependent Clp protease VFG0079 Protein 1e-150 54