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Name : clpC (BSUW23_00440) Accession : YP_003864456.1 Strain : Bacillus subtilis W23 Genome accession: NC_014479 Putative virulence/resistance : Virulence Product : class III stress response-related ATPase, AAA+ superfamily protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 97884 - 100316 bp Length : 2433 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAGGCACTCCGTTTAGGTCATAA TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGAATTGCTGCTAAAGCTCTACAAGCGCTTG GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCTAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA TATTCTTCTTGGTTTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG CCTACGCTTGACAGCTTGGCTAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGTAA GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTAATG ACATTAGATATGGGAACAGTTGTTGCCGGTACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTTATGGATGA AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGCGTATCAATTACAGATGATGCCATTGAAGCTG CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAAAA GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA CTCCCGTGTCATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCGAGAGCAGGATTAAAAGATC CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTGGCGCGAGCACTTGCTGAA TCCATTTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG TGCTTCTTGATGAGATTGAGAAAGCGCATCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTAACT GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA AACGCGCGTTCAGACCGGAGTTTATCAACCGGATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT GAAATCGTGTCATTGATGTCTGATCAATTAACAAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG AGGACCGTTTATCTGAAGAACTCCTCCGAGGGAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAG TTTGTCGTAAAAACGACTGCTAAAACGAATTAA Protein sequence : MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE FVVKTTAKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003864456.1 | class III stress response-related ATPase, AAA+ superfamily protein | VFG0079 | Protein | 0.0 | 79 |
| clpC | YP_003864456.1 | class III stress response-related ATPase, AAA+ superfamily protein | VFG0080 | Protein | 1e-152 | 52 |
