Gene Information

Name : FB2170_13261 (FB2170_13261)
Accession : YP_003863507.1
Strain : Maribacter sp. HTCC2170
Genome accession: NC_014472
Putative virulence/resistance : Virulence
Product : putative heat shock ClpB protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3247590 - 3250190 bp
Length : 2601 bp
Strand : +
Note : -

DNA sequence :
ATGAACTTTAATAATTTCACAATAAAATCACAGGAGGCCATTCAACTCGCCCAGCAAGTTGCACAAGAAAGGGAGCATCA
GCAAATTGAAAACGAACATATTTTTAAGGCAATTTCACAAGTAGATGAAAATGTTTTACCATTTATTTTGAAAAAACTAA
GCGTTAATTCAAACTTATTGAATCAGATTCTTGAAAAAGAACTGGAAAGTTTGCCAAAAGTTTCTGGAGGCGAAATCATG
GTTTCCCGAGAGGCAGGCAAAAGCTTGACCGAAGCAGGTATTATCGCCAAAAAAATGGAAGATGAGTTTGTTTCAATTGA
ACACCTGTTACTTGCCATTTTAAAATCCAAAAGCAAGATTTCGCAAATACTAAAAGATCAAGGGGTAACCGAAAAGGATC
TTAAGGCTGCCATTGAAGAACTTCGCAAAGGCGGAAAAGTCACCTCACAGAGTGCAGAAGAAACATACAACTCTTTGGAA
AAGTATGCTAGAAACCTAAACCAAATGGCAGATAGCGGTAAGCTAGATCCTGTCATTGGGCGTGATGAAGAAATTCGACG
CATTCTTCAGATACTTTCGAGAAGAACCAAAAATAACCCCATGCTCGTAGGTGAACCCGGTGTGGGTAAGACAGCAATTG
CCGAAGGATTAGCCCATAGAATAATTCAGGGTGATATTCCCGAAAACCTAAAAGATAAAATTATCTATTCTTTGGATATG
GGTGCACTTATTGCCGGAGCAAAATATAAGGGTGAGTTTGAAGAACGATTGAAAGCCGTAATAAAGGAAGTTACTTCTTC
CGATGGGAACATTGTTTTGTTTATTGATGAAATCCACACCCTTGTAGGTGCTGGAGGCGGTCAAGGAGCAATGGATGCAG
CGAACATACTTAAACCAGCACTGGCAAGAGGTGAACTTAGGGCGATTGGTGCCACTACTTTGGATGAATATCAAAAGTAC
TTTGAAAAAGACAAAGCCTTAGAAAGAAGATTTCAAAAAGTAGTGGTCAATGAACCAGAAACTGAAAGTGCGATTTCCAT
ATTGAGAGGAATCAAAGAAAAATATGAGGCACACCACAAAGTTCGTATTAAGGACGAAGCAGTAATTGCTGCTGTTGAAC
TTTCTCAACGCTATATTACCAATCGCTTTTTGCCAGACAAGGCTATTGACCTAATCGACGAGGCTGCCTCTAAACTGAGA
ATGGAAATCAACTCAAAGCCTGAGGAACTAGATGTACTTGATAGAAAAATAATGCAACTTGAGATTGAAATTGAGGCAAT
CAAACGTGAAGATGACAAGGCCAAGTTAAAACTATTAAATGTTGATCTTGCTAATTATAAGGAAAAACGAAATGGAGTTT
TTGCTAAATGGGAAAGTGAAAAATCTGTCGTAGATGCTATTCAAAAAGCTAAACAGGACATTGAAGACCATAAACTAGAA
GCTGAACGTGCCGAAAGAAGTGGTGACTACGGAAAAGTTGCCGAGCTTAGATATGGAAAAATTAAAGAAGCTCAGGAGAA
TTTGGACGTTTTGCAAAATGAACTTCTAGAGCAACAGAAAGGAGATACACTCATAAAAGAAGAAGTCACCAATGAGGACA
TAGCTGAAGTCGTTGCCAAATGGACAGGGATTCCCTTAACTAAAATGCTTCAAAGTGAGCGGGAAAAATTGTTAAAGCTT
GAAGAAGTGTTACATAAACGAGTAGTTGGTCAAGAAGAGGCCATACAGGCAGTTTCAGATGCCATTCGAAGAAGTAGAGC
GGGGTTACAAGATACTAAAAAGCCAATCGGATCTTTCCTTTTCTTAGGAACAACCGGTGTTGGTAAAACTGAGCTTGCAA
AAACCCTAGCGGCCTATTTATTCGATGACGAAAATGCAATGACCAGAATAGATATGAGTGAATATCAAGAAAGGCACTCT
GTAAGTAGATTGGTTGGTGCACCTCCAGGATATGTGGGTTATGACGAAGGTGGCCAGTTAACAGAAGCCGTTAGAAGAAG
ACCTTATTCAGTAGTATTATTGGATGAAATTGAAAAAGCACACCCAGATACTTTCAATATTCTGTTGCAAGTACTTGATG
AAGGAAGGCTAACTGACAACAAAGGTAGAGTCGCTGATTTCAAAAACACAATAATCATTATGACCAGTAATATGGGCAGT
CATATTATTCAAGAAAAGTTTGAAAACAATAAAGACATCCATAGTGCTTCGGAGACTGCCAGAATTGAAGTTCTAGGTTT
ATTGAGAAAAACAATTCGACCAGAATTCCTTAATAGAATTGATGACATTATTATGTTCACTCCTTTAAGTAAATCAGATA
TAACCCAGATTGTGGTTCTTCAAATAGAGCAATTGAAAAAAATGCTCAGTAAGCAGCATATAACAATTGATGCCACCAAT
GAGGCAATCACACATCTCGCTAATAAGGGTTATGACCCGCAATATGGGGCCAGACCCATTAAAAGAGTAATACAAAAAGA
GGTGCTAAATAGTCTGTCCAAAGAATTGTTGAGTGGATCCATAAAAACTGACAGCATAGTTTTGATAGATTCTTTTGATG
ACCAACTGGTCTTTAGAAACCAAAGTGAATTAGTGAATTAA

Protein sequence :
MNFNNFTIKSQEAIQLAQQVAQEREHQQIENEHIFKAISQVDENVLPFILKKLSVNSNLLNQILEKELESLPKVSGGEIM
VSREAGKSLTEAGIIAKKMEDEFVSIEHLLLAILKSKSKISQILKDQGVTEKDLKAAIEELRKGGKVTSQSAEETYNSLE
KYARNLNQMADSGKLDPVIGRDEEIRRILQILSRRTKNNPMLVGEPGVGKTAIAEGLAHRIIQGDIPENLKDKIIYSLDM
GALIAGAKYKGEFEERLKAVIKEVTSSDGNIVLFIDEIHTLVGAGGGQGAMDAANILKPALARGELRAIGATTLDEYQKY
FEKDKALERRFQKVVVNEPETESAISILRGIKEKYEAHHKVRIKDEAVIAAVELSQRYITNRFLPDKAIDLIDEAASKLR
MEINSKPEELDVLDRKIMQLEIEIEAIKREDDKAKLKLLNVDLANYKEKRNGVFAKWESEKSVVDAIQKAKQDIEDHKLE
AERAERSGDYGKVAELRYGKIKEAQENLDVLQNELLEQQKGDTLIKEEVTNEDIAEVVAKWTGIPLTKMLQSEREKLLKL
EEVLHKRVVGQEEAIQAVSDAIRRSRAGLQDTKKPIGSFLFLGTTGVGKTELAKTLAAYLFDDENAMTRIDMSEYQERHS
VSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS
HIIQEKFENNKDIHSASETARIEVLGLLRKTIRPEFLNRIDDIIMFTPLSKSDITQIVVLQIEQLKKMLSKQHITIDATN
EAITHLANKGYDPQYGARPIKRVIQKEVLNSLSKELLSGSIKTDSIVLIDSFDDQLVFRNQSELVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-154 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FB2170_13261 YP_003863507.1 putative heat shock ClpB protein VFG2076 Protein 5e-119 44