Gene Information

Name : FB2170_10016 (FB2170_10016)
Accession : YP_003862880.1
Strain : Maribacter sp. HTCC2170
Genome accession: NC_014472
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 2526696 - 2527694 bp
Length : 999 bp
Strand : -
Note : -

DNA sequence :
ATGGATATTTCAAGTCTAAAGTTAGATTCAAACCACCACATATTAGTTACAGGAGGAGCTGGATTTATTGGGTCAAACTT
ATGTGAGGTACTTCTTTCAAATAAAAACAGGGTTACCTGTTTGGACAATTTTTCCACAGGAAAAAGAGAGAACTTAGACC
ATTTGATTTCTGATAAAAAGTTTAGGTTGATTGAAGGTGATATTCGAAATATAAAGGACTGTCAAGAGGCATGTTCCAGT
GTTGACTATGTATTACATCAAGCTGCCCTAGGGTCTGTTCCAAGATCTATCAATGACCCAATTACGAGTAATGATGTTAA
CGTTTCTGGATTTTTAAACATGTTGGTTGCGGCGCGTGACGCCAATGTAAAACGTTTTATTTACGCTGCAAGTTCTTCAA
CCTACGGAGATTCAAAAAACATGCCCAAAGTTGAGGAGGTCATCGGCAAACCACTGTCTCCTTACGCTATTACAAAATAC
GTAAATGAACTATATGCCGATATTTTTAGTAAGTCTTTCGGCCTGGAAACAATTGGGTTACGATATTTCAATGTTTTTGG
CCGCAGACAGGACCCCAATGGGGCGTATGCAGCAGTAATCCCTAAATTTGTTATGCAACTGATGAAACATGAATCACCTG
TTATTAATGGTGACGGGAGTTATTCCAGGGACTTTACCTATATAGATAATGTCGTTGAAATGAATATTAGATCCATGCTT
GTTACAAATATTGAAGCTGTTAATACAGTCTATAATGTAGCATTTGGAGAACGTACTGATTTAAATGAACTTATTGGTCT
GCTAAAGAATTATCTAAGTGTTTTTGATGAGAACATAAAAAATATATCCGTTGTACATGGTGCTACACGCCAGGGAGATG
TTCCTCATTCTTTGGCCTCTATTGATAAGGCCAAAAAACTATTGGGGTATGACCCTAAGTTTGATATCAAGGCAGGATTA
AAAGAGGCAGTGGATTGGTATTGGAAACATTTAAGGTGA

Protein sequence :
MDISSLKLDSNHHILVTGGAGFIGSNLCEVLLSNKNRVTCLDNFSTGKRENLDHLISDKKFRLIEGDIRNIKDCQEACSS
VDYVLHQAALGSVPRSINDPITSNDVNVSGFLNMLVAARDANVKRFIYAASSSTYGDSKNMPKVEEVIGKPLSPYAITKY
VNELYADIFSKSFGLETIGLRYFNVFGRRQDPNGAYAAVIPKFVMQLMKHESPVINGDGSYSRDFTYIDNVVEMNIRSML
VTNIEAVNTVYNVAFGERTDLNELIGLLKNYLSVFDENIKNISVVHGATRQGDVPHSLASIDKAKKLLGYDPKFDIKAGL
KEAVDWYWKHLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 5e-84 57
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 5e-84 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FB2170_10016 YP_003862880.1 NAD-dependent epimerase/dehydratase family protein VFG0430 Protein 2e-84 57