Gene Information

Name : FB2170_08944 (FB2170_08944)
Accession : YP_003862678.1
Strain : Maribacter sp. HTCC2170
Genome accession: NC_014472
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 2271365 - 2273059 bp
Length : 1695 bp
Strand : -
Note : -

DNA sequence :
ATGCAACTTTCGGAACAAGAAGTAATAAGGAGGGAAAAATTGACAAAACTAAGGGAATTGGGTATCAACCCTTATCCCGC
AGCTTTATATCCTGTTGATGCAACATCAAATAGCATCAAACAGAATTATGAAGAGGGCAAAAAAGTTATAATTTCTGGTA
GATTAATGTCTCGCCGTATTCAGGGAAAAGCATCATTTGCAGAATTACAAGATAGTGAAGGTCGTATTCAGGTTTATTTC
AATAGAGATGAAATTTGTGTTGGCGAGGACAAAACCAAATACAATGAAGTTTATAAAAAATTACTTGATATAGGCGACAT
CATCGGAATTGAAGGTGAACTCTTCACCACCCAAGTTGGTGAAAAAACCGTAATGGTGAAGGATTTCAGCATGCTTAGTA
AAGCATTGCGACCTTTGCCACTACCGAAGAAAGATGGTGAGGGTAATGTATATGATGAATTCAACGACCCAGAATTAAGG
TACCGTCAACGCTATATTGATTTGGTTGTAAACCCTTCTGTCAGGGAAACCTTTATTAAACGAACCAAGATTACCAATAG
CATACGTGAGTTTTTAAATAACAAGGGGTATTTAGAGGTAGAAACCCCTATTCTACAGCCCATTCCAGGAGGTGCAGCTG
CACGACCATTTCTTACCCATCATAATGCGCTGAACATTCCTTTATATTTAAGAATTGCCAATGAATTATATCTAAAACGA
TTAATTGTCGGAGGTTTTGATGGGGTATACGAATTTGCTAAGGACTTTAGGAATGAAGGTATGGACCGCACCCACAATCC
CGAATTCACAATGATCGAATTGTATGTGGCGTATAAAGATTATAATTGGATGATGGGCATGACGGAACAGTTGCTTGAAA
AAGTGGCTAAAGATGCTACCGGTAGTACCAAGGTTACCGTTGGCGACAAGGAAATTGATTTTAAAGCCCCTTACCCGAGG
GTCCCTATCCTAGATGCCATTAAAACCCATACGGGCTTTGACGTATCGGCAATGAACGAAGCCCAGTTGCGTGAAGTATG
CAAAAAGCTTCATTTGGAAGTAGATGAGAGTTTTGGGCGTGGAAAACTAATCGATGAAATTTTTGGTGAGAAGTGTGAGC
ATTTATATGTACAACCTACTTTCATCACCGACTATCCCAAGGAAATGAGTCCGTTGACGAAGGCGCATCGATCTAAACCT
GGACTTACAGAACGTTTTGAACTGATGGTCAACGGAAGCGAATTAGCCAATGCTTATTCTGAACTAAATGACCCCATAGA
TCAACGAGAGCGCTTTGAACATCAATTGGCGCTTGCACAAAAAGGAGATGATGAGGCGACCCAATTCATTGATTATGATT
TTCTTCGTGCCTTGGAATATGGTATGCCCCCAACATCTGGTATTGGCATCGGAATAGACCGCCTTGTGATGTTTATGACA
AATAATTCTTCAATTCAGGAAGTATTGTTTTTCCCGCAGATGCGACCAGAGAAAAAACAGATTGAACTGACCGAAGAAGA
AAAAACAATTCTAGATCTTCTAAAACCAGAAGGCGAGATGGATTTGGCAGAGCTAAAATCTAAAGCCGGACTCAGTGGCA
AAAAATGGGATAAATCAATGAAAGGTTTATCAAAACATGATTTAATCAAGGTTGTTGTTGATGGCCCTTCTAAGACCGTC
CATCTGAAATCTTAG

Protein sequence :
MQLSEQEVIRREKLTKLRELGINPYPAALYPVDATSNSIKQNYEEGKKVIISGRLMSRRIQGKASFAELQDSEGRIQVYF
NRDEICVGEDKTKYNEVYKKLLDIGDIIGIEGELFTTQVGEKTVMVKDFSMLSKALRPLPLPKKDGEGNVYDEFNDPELR
YRQRYIDLVVNPSVRETFIKRTKITNSIREFLNNKGYLEVETPILQPIPGGAAARPFLTHHNALNIPLYLRIANELYLKR
LIVGGFDGVYEFAKDFRNEGMDRTHNPEFTMIELYVAYKDYNWMMGMTEQLLEKVAKDATGSTKVTVGDKEIDFKAPYPR
VPILDAIKTHTGFDVSAMNEAQLREVCKKLHLEVDESFGRGKLIDEIFGEKCEHLYVQPTFITDYPKEMSPLTKAHRSKP
GLTERFELMVNGSELANAYSELNDPIDQRERFEHQLALAQKGDDEATQFIDYDFLRALEYGMPPTSGIGIGIDRLVMFMT
NNSSIQEVLFFPQMRPEKKQIELTEEEKTILDLLKPEGEMDLAELKSKAGLSGKKWDKSMKGLSKHDLIKVVVDGPSKTV
HLKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 6e-92 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
FB2170_08944 YP_003862678.1 lysyl-tRNA synthetase VFG1668 Protein 4e-92 43