Gene Information

Name : FB2170_03855 (FB2170_03855)
Accession : YP_003861688.1
Strain : Maribacter sp. HTCC2170
Genome accession: NC_014472
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 1119344 - 1120669 bp
Length : 1326 bp
Strand : -
Note : -

DNA sequence :
ATGGCATTAATAGGAGATAAGGAATATTTTAAAGGAATTGGGGAAATTAAATTTGAAGGAAAGGAATCAAATAACCCCTT
GGCATTCAAGTTCTATAATCCTGAACAAATAGTTGCTGGTAAAACAATGCGTGAGCATTTCAAATTTGCCATTGCGTATT
GGCATACCTTCTGCGGCCAGGGTTCCGATCCTTTTGGTCCAGGCACACAAGATTTTGCTTGGGACAAATCATCAGACCCA
ATTCAGGCTGCGAAAGATAAGGCGGATGCTGCTTTTGAGTTTATCACAAAAATGGGTTTTGACTACTTCTGTTTTCATGA
TTTTGACTTGATTCAAGAGGGCGGGTCTTTTTTAGAGTCCGAGAGTAGATTGGCTGCTATTACTGAGTATATAAAAGAAA
AGAAGGCGGCTTCAGGGGTTAAACTTCTATGGGGTACCGCTAACTGTTTTTCCAATCCTAGATATATGAATGGGGCTGCG
ACTAACCCAGAATTTGATGTTGTTGCTAGAGCTGGCGGACAGATTAAACTGGCATTGGATGCAACAATGGCTCTTGACGG
CGAAAATTATGTTTTTTGGGGAGGTAGAGAAGGATACATGTCTTTATTGAATACCGATATGGGTCGAGAATTGGATCATA
TGGGGCGGTTTTTGACAATGGCGAGAGATTATGCTAGAGGGCAAGGTTTTAAGGGGAATTTCTTTATTGAACCCAAGCCT
ATGGAGCCAATGAAACATCAATACGACTTTGATACAGCCACAGCTATAGGTTTTCTTAAAGAGTATGGATTAGAGAATGA
TTTTAAAATTAATATTGAAGTAAACCATGCCACACTTGCGCAACATACGTTTCAACATGAAATAGCCGTTGCAGGCAAAG
CGGGAATGTTAGGTAGTTTAGATGCCAATCGTGGAGATTACCAAAATGGTTGGGATACGGATCAGTTTCCTAACAATATT
CAAGAAACGACCGAGGCGATGTTAGTTTTCCTGGCTGCAGGGGGTTTACAAGGCGGAGGTATAAATTTTGATGCCAAAAT
CAGAAGAAATTCCACTGATATCGATGATGTTTTTCATGCACATATTGGTGGGGCAGATACTTTTGCTCGAGCATTGTTGA
CAGCTGAAAAAATTATTTCTTCCTCAGATTATGAAAAATTAAGACAGAATAGATACAGTTCTTTTGACTCAGGGAAAGGT
AAGGACTTTGAGAATGGTAAATTAAACTTTGAAGATCTTTACCAATTGGCAAAAAATAATGGCGAGTTAGAGCTGAAAAG
TGGAAAACAAGAACTGCTTGAAAATATCATCAACCAGTATTTATAG

Protein sequence :
MALIGDKEYFKGIGEIKFEGKESNNPLAFKFYNPEQIVAGKTMREHFKFAIAYWHTFCGQGSDPFGPGTQDFAWDKSSDP
IQAAKDKADAAFEFITKMGFDYFCFHDFDLIQEGGSFLESESRLAAITEYIKEKKAASGVKLLWGTANCFSNPRYMNGAA
TNPEFDVVARAGGQIKLALDATMALDGENYVFWGGREGYMSLLNTDMGRELDHMGRFLTMARDYARGQGFKGNFFIEPKP
MEPMKHQYDFDTATAIGFLKEYGLENDFKINIEVNHATLAQHTFQHEIAVAGKAGMLGSLDANRGDYQNGWDTDQFPNNI
QETTEAMLVFLAAGGLQGGGINFDAKIRRNSTDIDDVFHAHIGGADTFARALLTAEKIISSSDYEKLRQNRYSSFDSGKG
KDFENGKLNFEDLYQLAKNNGELELKSGKQELLENIINQYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 3e-97 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 2e-97 52